Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4070
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   153   3e-37
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   153   3e-37
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   153   3e-37
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   153   3e-37
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   150   2e-36
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    32   1.0  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  153 bits (370), Expect = 3e-37
 Identities = 77/136 (56%), Positives = 84/136 (61%)
 Frame = +2

Query: 17  VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 196
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 68  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 127

Query: 197 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 376
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                        
Sbjct: 128 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 187

Query: 377 XLLQTFAREDEAALTA 424
            L+   A+EDE A  A
Sbjct: 188 ELIALHAKEDEIAAKA 203


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  153 bits (370), Expect = 3e-37
 Identities = 77/136 (56%), Positives = 84/136 (61%)
 Frame = +2

Query: 17  VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 196
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 81  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 140

Query: 197 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 376
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                        
Sbjct: 141 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 200

Query: 377 XLLQTFAREDEAALTA 424
            L+   A+EDE A  A
Sbjct: 201 ELIALHAKEDEIAAKA 216


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  153 bits (370), Expect = 3e-37
 Identities = 77/136 (56%), Positives = 84/136 (61%)
 Frame = +2

Query: 17  VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 196
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 122

Query: 197 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 376
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                        
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 182

Query: 377 XLLQTFAREDEAALTA 424
            L+   A+EDE A  A
Sbjct: 183 ELIALHAKEDEIAAKA 198


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  153 bits (370), Expect = 3e-37
 Identities = 77/136 (56%), Positives = 84/136 (61%)
 Frame = +2

Query: 17  VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 196
           VRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 122

Query: 197 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 376
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                        
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 182

Query: 377 XLLQTFAREDEAALTA 424
            L+   A+EDE A  A
Sbjct: 183 ELIALHAKEDEIAAKA 198


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  150 bits (363), Expect = 2e-36
 Identities = 76/136 (55%), Positives = 83/136 (61%)
 Frame = +2

Query: 17  VRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 196
           VRKNTEARRK RHCGFGKR+GTANARMP K LW                +KKIDRHLYH 
Sbjct: 63  VRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHD 122

Query: 197 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 376
           LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                        
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 182

Query: 377 XLLQTFAREDEAALTA 424
            L+   A+EDE A  A
Sbjct: 183 ELIALHAKEDEIAAKA 198


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -3

Query: 252  YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 79
            YS++   +L  L        +YR    FL   +++ NF  TLC C +S FCG  A  V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,029,755
Number of Sequences: 53049
Number of extensions: 593962
Number of successful extensions: 1620
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)