Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4055
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013404-1|AAH13404.1|  241|Homo sapiens tetraspanin 1 protein.        30   7.2  
BC007290-1|AAH07290.1|  241|Homo sapiens tetraspanin 1 protein.        30   7.2  
AL672043-1|CAH72468.1|  241|Homo sapiens tetraspanin 1 protein.        30   7.2  
AF133425-1|AAF08364.1|  241|Homo sapiens tetraspanin TM4-C protein.    30   7.2  
AF065388-1|AAC17119.1|  241|Homo sapiens tetraspan NET-1 protein.      30   7.2  
AF054838-1|AAC69714.1|  241|Homo sapiens tetraspan TM4SF protein.      30   7.2  

>BC013404-1|AAH13404.1|  241|Homo sapiens tetraspanin 1 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


>BC007290-1|AAH07290.1|  241|Homo sapiens tetraspanin 1 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


>AL672043-1|CAH72468.1|  241|Homo sapiens tetraspanin 1 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


>AF133425-1|AAF08364.1|  241|Homo sapiens tetraspanin TM4-C protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


>AF065388-1|AAC17119.1|  241|Homo sapiens tetraspan NET-1 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


>AF054838-1|AAC69714.1|  241|Homo sapiens tetraspan TM4SF protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 552 RCYSFETKSNALFFNVLT-LVPNALLVVGPLVSPHG*VPPLRLFLP*SSNAFRFEEWG 382
           +C+SF  K+  + FN+L  L   ALL VG  VS  G    L++F P SS+A +F   G
Sbjct: 2   QCFSF-IKTMMILFNLLIFLCGAALLAVGIWVSIDG-ASFLKIFGPLSSSAMQFVNVG 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,815,592
Number of Sequences: 237096
Number of extensions: 2307113
Number of successful extensions: 3254
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3254
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)