Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4051
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.96 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.96 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 413 AVKVLFSSDERAADERTDREVTRAFNPEAQCFRPVEPAAGAVTASARGLLS 565
           AVKV  ++D+R  D+   R   +A       F   E A G + A+ R  LS
Sbjct: 172 AVKVPSAADDRMFDDIIQRLSKKANARAVVLFTRAEDARGILEAARRSNLS 222


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 413 AVKVLFSSDERAADERTDREVTRAFNPEAQCFRPVEPAAGAVTASARGLLS 565
           AVKV  ++D+R  D+   R   +A       F   E A G + A+ R  LS
Sbjct: 262 AVKVPSAADDRMFDDIIQRLSKKANARAVVLFTRAEDARGILEAARRSNLS 312


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 634 QHQAQNEQQARKPHVSHRIQQLHKAARDA 720
           QHQ+Q +QQ  + H  H + Q  + ++ A
Sbjct: 185 QHQSQAQQQHLQAHEQHMMYQQQQQSQAA 213


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 604 QLHLHRTKVRQHQAQNEQQARKPHVSHRIQQLHKAARDAQ 723
           QLH H++   Q QAQ + Q ++     + QQ  +  +  Q
Sbjct: 813 QLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQ 852



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 631  RQHQAQNEQQARKPHVSHRIQQLHKA 708
            +Q Q Q +QQ ++     + QQ H+A
Sbjct: 1211 QQQQQQQQQQQQQQQQQQQQQQQHQA 1236


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 223 VPGQTVPGLCVPMPENWRP 279
           +P ++ PG+ V   E+WRP
Sbjct: 131 IPDKSFPGVGVIDFESWRP 149


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 40  WQAPSIFSIRLFTSA 84
           W AP   + R FTSA
Sbjct: 804 WTAPEAIAFRKFTSA 818


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,418
Number of Sequences: 438
Number of extensions: 4836
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)