Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4033
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   2.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.3  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   5.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.7  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   7.7  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 440  FINASMYGVPIPLTSDSHPIQKRYVIHCFAI 348
            + NAS YG        ++PI+  Y  + F++
Sbjct: 1607 YYNASFYGSDRSFAIQNYPIESEYARYFFSV 1637


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 107 VPVTRALYELITLSRDHLTW 48
           VP +R++  L  L  DHL+W
Sbjct: 744 VPYSRSIKHLGVLVHDHLSW 763


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -3

Query: 240 GVAGSNPAKGRYLCDKYKCLFQGYGCIL 157
           G + +    G  +CD  KC  + + C++
Sbjct: 44  GESNARIENGTIICDTLKCPAESFKCVI 71


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 195 YHTNIFPWRDSNPRPP 242
           Y   + PW+D N  PP
Sbjct: 928 YALRLLPWQDRNNLPP 943


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 474 IYFKHGSKGELFYQCFDVWCAYSTNQRLPSHTKKV 370
           +YF+H   G++  + F  WC     ++L +  KK+
Sbjct: 166 LYFEHEFLGKVPSKHFLPWCTTGGTKKLRTLHKKL 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,994
Number of Sequences: 2352
Number of extensions: 12418
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)