Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4032
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein.         42   0.002
BC045763-1|AAH45763.1| 1329|Homo sapiens SDK2 protein protein.         42   0.002
AL137357-1|CAB70709.1| 1185|Homo sapiens hypothetical protein pr...    42   0.002
AK001694-1|BAA91841.1|  574|Homo sapiens protein ( Homo sapiens ...    42   0.002

>BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein.
          Length = 1805

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
 Frame = +2

Query: 47   LYHSDEESLRAYDA-NADDSSLTEKPXXXXXXXXXXXXXXXXXXXXXPHSFVNHYANVND 223
            L++SDE+  +  D   A+ SSLTEKP                      HSFVNHY + + 
Sbjct: 1656 LHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDSNHQKAHSFVNHYIS-DP 1714

Query: 224  TLRQSWKKQRPVRNYS---SYTDS---EPEGSAVVSLNGGQ 328
            T   SW++Q+   + +   SYT+S   EP+ + V +    Q
Sbjct: 1715 TYYNSWRRQQKGISRAQAYSYTESDSGEPDHTTVTNSTSTQ 1755


>BC045763-1|AAH45763.1| 1329|Homo sapiens SDK2 protein protein.
          Length = 1329

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
 Frame = +2

Query: 47   LYHSDEESLRAYDA-NADDSSLTEKPXXXXXXXXXXXXXXXXXXXXXPHSFVNHYANVND 223
            L++SDE+  +  D   A+ SSLTEKP                      HSFVNHY + + 
Sbjct: 1180 LHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDSNHQKAHSFVNHYIS-DP 1238

Query: 224  TLRQSWKKQRPVRNYS---SYTDS---EPEGSAVVSLNGGQ 328
            T   SW++Q+   + +   SYT+S   EP+ + V +    Q
Sbjct: 1239 TYYNSWRRQQKGISRAQAYSYTESDSGEPDHTTVTNSTSTQ 1279


>AL137357-1|CAB70709.1| 1185|Homo sapiens hypothetical protein
            protein.
          Length = 1185

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
 Frame = +2

Query: 47   LYHSDEESLRAYDA-NADDSSLTEKPXXXXXXXXXXXXXXXXXXXXXPHSFVNHYANVND 223
            L++SDE+  +  D   A+ SSLTEKP                      HSFVNHY + + 
Sbjct: 992  LHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDSNHQKAHSFVNHYIS-DP 1050

Query: 224  TLRQSWKKQRPVRNYS---SYTDS---EPEGSAVVSLNGGQ 328
            T   SW++Q+   + +   SYT+S   EP+ + V +    Q
Sbjct: 1051 TYYNSWRRQQKGISRAQAYSYTESDSGEPDHTTVTNSTSTQ 1091


>AK001694-1|BAA91841.1|  574|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10832 fis, clone NT2RP4001150, weakly similar to
           NG-CAM RELATED CELL ADHESION MOLECULE PRECURSOR. ).
          Length = 574

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 47  LYHSDEESLRAYDA-NADDSSLTEKPXXXXXXXXXXXXXXXXXXXXXPHSFVNHYANVND 223
           L++SDE+  +  D   A+ SSLTEKP                      HSFVNHY + + 
Sbjct: 425 LHYSDEDVTKYNDLIPAESSSLTEKPSEISDSQGSDSEYEVDSNHQKAHSFVNHYIS-DP 483

Query: 224 TLRQSWKK-QRPVRNYSSYTDSEPE 295
           T   SW++ QR +    +Y+ +E +
Sbjct: 484 TYYNSWRRQQRGISRAQAYSYTESD 508


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,423,829
Number of Sequences: 237096
Number of extensions: 1428183
Number of successful extensions: 2982
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2982
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)