Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4032
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 272 WSNYVRVAVSSKTVVTYR*RWRNDSRK 192
           W +++R+  S  T  TYR R RN++ K
Sbjct: 491 WFHWIRITQSGPTRTTYRWRGRNETIK 517


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 272 WSNYVRVAVSSKTVVTYR*RWRNDSRK 192
           W +++R+  S  T  TYR R RN++ K
Sbjct: 488 WFHWIRITQSGPTRTTYRWRGRNETIK 514


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 272 WSNYVRVAVSSKTVVTYR*RWRNDSRK 192
           W +++R+  S  T  TYR R RN++ K
Sbjct: 495 WFHWIRITQSGPTRTTYRWRGRNETIK 521


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,078,467
Number of Sequences: 27780
Number of extensions: 215305
Number of successful extensions: 635
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)