Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4026
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 56 2e-08
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 56 2e-08
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 56 2e-08
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 47 1e-05
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 45 6e-05
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.15
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.59
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 31 0.59
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 31 0.59
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 31 0.59
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 31 0.78
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 30 1.8
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 28 7.2
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 28 7.2
AL110498-5|CAL69743.1| 134|Caenorhabditis elegans Hypothetical ... 28 7.2
AF026215-9|AAB71318.2| 319|Caenorhabditis elegans Hypothetical ... 28 7.2
U70850-2|AAB09123.1| 229|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 27 9.6
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHI--ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTN 598
G +QA + VGD + E++G+ + S E L+E + +VT K+ P+ +
Sbjct: 236 GGMIHRQATLHVGDEIREINGMSVANRSVESLQEMLRDARGQVTFKIIPSYRSAPPACE- 294
Query: 599 KLTCYVRTLFDYNPIQDTLIPCKEIGLTFK 688
+VR FDY P QD LIPC + G+ FK
Sbjct: 295 ---IFVRAQFDYEPSQDDLIPCPQAGIPFK 321
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 325 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARIL 420
+++V +K +P+G+T+ +E G+ VARI+
Sbjct: 203 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIM 234
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHI--ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTN 598
G +QA + VGD + E++G+ + S E L+E + +VT K+ P+ +
Sbjct: 577 GGMIHRQATLHVGDEIREINGMSVANRSVESLQEMLRDARGQVTFKIIPSYRSAPPACE- 635
Query: 599 KLTCYVRTLFDYNPIQDTLIPCKEIGLTFK 688
+VR FDY P QD LIPC + G+ FK
Sbjct: 636 ---IFVRAQFDYEPSQDDLIPCPQAGIPFK 662
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 325 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARIL 420
+++V +K +P+G+T+ +E G+ VARI+
Sbjct: 544 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIM 575
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHI--ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTN 598
G +QA + VGD + E++G+ + S E L+E + +VT K+ P+ +
Sbjct: 236 GGMIHRQATLHVGDEIREINGMSVANRSVESLQEMLRDARGQVTFKIIPSYRSAPPACE- 294
Query: 599 KLTCYVRTLFDYNPIQDTLIPCKEIGLTFK 688
+VR FDY P QD LIPC + G+ FK
Sbjct: 295 ---IFVRAQFDYEPSQDDLIPCPQAGIPFK 321
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 325 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARIL 420
+++V +K +P+G+T+ +E G+ VARI+
Sbjct: 203 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIM 234
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHI--ESEEQLKEAVAKPNDRVTLKVGPNLKEKSSQLTN 598
G +QA + VGD + E++G+ + S E L+E + +VT K+ P+ +
Sbjct: 577 GGMIHRQATLHVGDEIREINGMSVANRSVESLQEMLRDARGQVTFKIIPSYRSAPPACE- 635
Query: 599 KLTCYVRTLFDYNPIQDTLIPCKEIGLTFK 688
+VR FDY P QD LIPC + G+ FK
Sbjct: 636 ---IFVRAQFDYEPSQDDLIPCPQAGIPFK 662
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 325 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARIL 420
+++V +K +P+G+T+ +E G+ VARI+
Sbjct: 544 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIM 575
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Frame = +2
Query: 422 AGSAAAKQALVSVGDVLLEVDGVHIESEE--QLKEAVAK-PNDRVTLKVGP---NLKEKS 583
A A + + GD +LEV+G+ + +E ++ + + K N +T K+ P N K K
Sbjct: 158 ANGVADRSGCIQEGDRVLEVNGITVADKEPREIVKLLDKCDNGIITFKLIPAEINQKLKQ 217
Query: 584 SQLTNKLTCYVRTLFDYNPIQDTLIPCKEIGLTFK 688
+ +++ Y R LFDY+P QD PC E ++F+
Sbjct: 218 KKSSHR---YARALFDYDPWQDKRHPCPEAAISFR 249
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHIESEE--QLKEAVAKPNDRVTLKVGPNLKEKSSQ--- 589
G K L GD LLE++G ++ ++ ++ + + + +T V P ++ + Q
Sbjct: 265 GGIVEKMNLFQEGDELLELNGSSLKGKQVNEICDILRNLSGPITFVVAPKEEQDTEQPTD 324
Query: 590 -LTNKLTC--------YVRTLFDYNPIQDTLIPCKEIGLTFK 688
TN +T ++R LFDY+P D +PCKE+ + F+
Sbjct: 325 TATNTVTAKKSQQHVQHLRALFDYDPEDDVYVPCKELAMKFQ 366
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
S A +A + GD LLE+DG+ + S +++ E + + D +TLKV
Sbjct: 480 SGMAVRAGLRPGDYLLEIDGIDVRRCSHDEVVEFIQQAGDTITLKV 525
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
S A +A + GD LLE+DG+ + S +++ E + + D +TLKV
Sbjct: 480 SGMAVRAGLRPGDYLLEIDGIDVRRCSHDEVVEFIQQAGDTITLKV 525
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 332 TFTVSIGISPLPSGLSFENSIRSGNSFGINLSSIPDPLSNQILPIWS*ASINALKCALDT 153
T + GIS P+ S ++ S +S G + S +P +S LPI S ++ ++ A T
Sbjct: 3 TSPTTAGISSSPAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASST 62
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.59
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHIES--EEQLKEAVAKPNDRV--TLKVGPN----LKEK 580
G A V GDVLLEV+GV + + ++ EA+ + V TL+ P + K
Sbjct: 541 GGVADLSGNVKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYRPQEYQIFESK 600
Query: 581 SSQLTNKLTC------------YVRTLFDYNPI-QDTLIPCKEIGLTF 685
+L N + YVR LFDY+P ++++ P + +G +
Sbjct: 601 IEKLRNDVIAQSRMGTLSRKSEYVRALFDYDPSRENSVAPHRSMGFNY 648
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.59
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHIES--EEQLKEAVAKPNDRV--TLKVGPN----LKEK 580
G A V GDVLLEV+GV + + ++ EA+ + V TL+ P + K
Sbjct: 541 GGVADLSGNVKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYRPQEYQIFESK 600
Query: 581 SSQLTNKLTC------------YVRTLFDYNPI-QDTLIPCKEIGLTF 685
+L N + YVR LFDY+P ++++ P + +G +
Sbjct: 601 IEKLRNDVIAQSRMGTLSRKSEYVRALFDYDPSRENSVAPHRSMGFNY 648
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like
protein DLG-1 protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.59
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Frame = +2
Query: 425 GSAAAKQALVSVGDVLLEVDGVHIES--EEQLKEAVAKPNDRV--TLKVGPN----LKEK 580
G A V GDVLLEV+GV + + ++ EA+ + V TL+ P + K
Sbjct: 541 GGVADLSGNVKTGDVLLEVNGVVLRNATHKEAAEALRNAGNPVYLTLQYRPQEYQIFESK 600
Query: 581 SSQLTNKLTC------------YVRTLFDYNPI-QDTLIPCKEIGLTF 685
+L N + YVR LFDY+P ++++ P + +G +
Sbjct: 601 IEKLRNDVIAQSRMGTLSRKSEYVRALFDYDPSRENSVAPHRSMGFNY 648
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -2
Query: 395 PCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNSFGINLSSIPDPLS 216
P +S T P+ P L TT VS + P PS + N + SGNS G+N S
Sbjct: 192 PSTSSNTSHPE-LPAGILPATTTNVSAAVPP-PSSRATAN-VFSGNSIGLNFSGAASVTR 248
Query: 215 NQILP 201
+ ++P
Sbjct: 249 HLVVP 253
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 338 PTTFTVSIGISPLPSGLSFENSIRSGNSFGINLSSIPDPLSNQI 207
P + + G+ + S L+FEN + + NS+ +++ I LS +I
Sbjct: 288 PAVYGLGAGVGEVLSELTFENFLTTKNSYKVSVGMIVSELSKRI 331
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 527 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 572
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 549 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 594
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 549 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 594
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 340 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 385
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 647 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 692
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 527 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 572
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 549 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 594
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 549 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 594
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 340 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 385
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 647 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 692
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 358 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 403
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 428 SAAAKQALVSVGDVLLEVDGVHIE--SEEQLKEAVAKPNDRVTLKV 559
SAA+ ++ V D++LEV+G +E S + K D+V LK+
Sbjct: 318 SAASSSGVIKVHDLILEVNGTTLEHMSHADSVRTLVKSGDQVKLKL 363
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 211 WLERGSGIDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVP 354
WL+ + K++ E D++ + +P+G GD PIE V + +P
Sbjct: 143 WLDGKHVVFGKIL--EGMDVVREIEATPKGAGDRPIEDVVIANAGHIP 188
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 211 WLERGSGIDDKLIPNEFPDLIEFSKESPEGNGDMPIETVKVVGLRKVP 354
WL+ + K++ E D++ + +P+G GD PIE V + +P
Sbjct: 143 WLDGKHVVFGKIL--EGMDVVREIEATPKGAGDRPIEDVVIANAGHIP 188
>AL110498-5|CAL69743.1| 134|Caenorhabditis elegans Hypothetical
protein Y64G10A.10 protein.
Length = 134
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 479 LPVEHHQQILRPVLLLHFLQSILATISCPCSSVVTVKPKGCPGTF 345
LP IL +L + ++ +TIS +S++ P C G +
Sbjct: 55 LPTNTVSSILSEILSSSYDSNVFSTISATVASILATAPSSCSGNW 99
>AF026215-9|AAB71318.2| 319|Caenorhabditis elegans Hypothetical
protein F09G2.2 protein.
Length = 319
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -2
Query: 530 LLQLPSVAPLIQCEPRLLPVEHHQQILRPVLLLHFLQSILATISCPCSSVVTVKPKGCPG 351
LLQL S+ P++ +L+ ++ L L + + L+T+S P +S PK
Sbjct: 181 LLQLSSMVPIMDIVKQLIEFISSTSLIY-CLTLALMSTTLSTVSEPSTSADVTSPKDNNQ 239
Query: 350 TF 345
TF
Sbjct: 240 TF 241
>U70850-2|AAB09123.1| 229|Caenorhabditis elegans Hypothetical
protein F28F9.2 protein.
Length = 229
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 506 PLIQCEPRLLPVEHHQQILRPVLLLHFLQSILATISCPCSS 384
PL Q P++L + Q + +L + + L+T CPC+S
Sbjct: 79 PLTQLYPQILYFHLNFQTKKCLLTMMMRRCALSTAQCPCTS 119
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 240 VIYTRSSFQPNFTYLVMSFY*CLKMCPG 157
+IY + PNFTY +M+F L++ G
Sbjct: 42 IIYKQDKTTPNFTYKLMNFILLLQLLQG 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,762,996
Number of Sequences: 27780
Number of extensions: 309246
Number of successful extensions: 821
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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