Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4023
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0744 + 27336697-27337131,27337329-27337787,27340852-273424...    28   7.0  
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97...    27   9.3  

>03_05_0744 +
           27336697-27337131,27337329-27337787,27340852-27342418,
           27342641-27343044
          Length = 954

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 598 QISLKFLLKTREKPERAACKLIYTKNINSCLRILHHSDQFLLFQTPNYTC 449
           Q+SL+ LL       R   +L Y +N  SCLR+LH     L+   P+Y C
Sbjct: 503 QVSLRTLLLFG----RCITELTYFRNNISCLRVLHLQGVDLV-DLPDYIC 547


>09_01_0066 -
           978018-978500,978588-979034,979113-979412,979521-979855,
           980325-980703
          Length = 647

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -3

Query: 211 RIFARCERRSV*RLKQAHRNVPNKPRAPATGEATGEMYRANRAMRRASKTNA 56
           RI     RR         R  P KP +P TG A   +YRA R  R+  +  A
Sbjct: 39  RILTDARRRPPPSPTPPARRRPTKPASPPTGAA---LYRARRCRRKLLRCRA 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,194
Number of Sequences: 37544
Number of extensions: 309277
Number of successful extensions: 758
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)