Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4021
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 60 1e-09
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 55 5e-08
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 50 2e-06
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 46 4e-05
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 41 8e-04
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 36 0.023
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 33 0.21
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 32 0.49
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 31 1.1
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 30 2.0
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 2.6
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 29 3.4
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 29 4.5
07_03_1124 + 24157441-24157483,24157989-24158020,24158135-241583... 29 4.5
07_03_1551 + 27646445-27647096,27647229-27647374 28 6.0
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Frame = +1
Query: 76 INMEVQYLVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGE----YDVTEIQGQ 243
+ + V V+ + + +A+ L + KC+ EE+ +NV+V + Y+
Sbjct: 11 LTLAVAAAVIAAACLLLCAEAVWLDLPQSGTKCVSEEIQSNVVVLADYALMYESHPSSHP 70
Query: 244 RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKI 423
+ + G+ L + T G+F+F T + CF + S +G ++LD KI
Sbjct: 71 TIAVKVTSPYGNTLHHNENATVGQFAFTTSEAGNYLACF--WIDSAEKGSGISINLDWKI 128
Query: 424 GIEAKTYEGIGEAAKLKPMEVELKRLARPIRS 519
GI AK ++ I + K++ +E+EL++L ++S
Sbjct: 129 GIAAKDWDVIAKKEKIEGVELELRKLEVAVQS 160
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 55.2 bits (127), Expect = 5e-08
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Frame = +1
Query: 97 LVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSK- 273
++LLLS A+ + L KC+ +E+ N +V G+Y V D + DS
Sbjct: 24 VLLLLSAAPRTARALRFDLESGHTKCISDEIKVNSMVVGKYHVVGPDPNFPDNPLPDSHR 83
Query: 274 ---------GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 426
G+ + + V G F+F + CF + P + + D + G
Sbjct: 84 ISLRVTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFWA--PDHKPPVSIGFEFDWRSG 141
Query: 427 IEAKTYEGIGEAAKLKPMEVELKRLARPIRS-YRSRFHTNEEKRRRNERYQ*INE**SFI 603
+ AK + + + ++ ME+ELK+L I+S + F+ E + + N ++
Sbjct: 142 VAAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAW- 200
Query: 604 LPYILDGVPLGVWATWQVLYLRRFFK 681
L ++ G+ L V A Q+ +L+ FF+
Sbjct: 201 LGFLSLGICLSV-AGLQLWHLKTFFE 225
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 503 QDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFRIFSMA-CLLGSG 643
++ ++I ++ +R+REEEM++ N+ TN+R+ + S+ CL +G
Sbjct: 167 EETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLGFLSLGICLSVAG 214
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +1
Query: 274 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 453
G+ + + T G+F+F T + CF P + G+ ++LD KIGI AK ++ +
Sbjct: 104 GNTVHHNENATTGQFAFTTSEAGNYLACFWLDSPEKGSGV--SLNLDWKIGIAAKDWDTV 161
Query: 454 GEAAKLKPMEVELKRLARPIRS 519
+ K++ +E+EL++L + S
Sbjct: 162 AKKEKIEGVELELRKLEAAVES 183
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 88 VQYLVLLLSLIWHG--TDAIMWSLAPNTHKCLKEELHANVLVAGEY 219
V +V++++L+ G +A+ L P KC+ EE+ NV+V +Y
Sbjct: 4 VAAMVVVVALLLGGGAVEAVWLDLPPTGTKCVSEEIQPNVVVLADY 49
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/82 (28%), Positives = 47/82 (57%)
Frame = +1
Query: 274 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 453
G I+ K V+ G+FSF T + CF + ++R + +++LD ++GI K ++ +
Sbjct: 125 GDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVV--KLNLDWRVGIATKDWDSV 182
Query: 454 GEAAKLKPMEVELKRLARPIRS 519
+ KL+ +E+EL +L +++
Sbjct: 183 AKKEKLEGVELELVKLETSVQA 204
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 112 SLIWH---GTDAIMWSLAPNTHKCLKEELHANVLVAGEYDV 225
+L+W G A+ + P+ KC+ EE+ +NV+V G+Y V
Sbjct: 16 ALLWWMAAGAGAVWLEIPPSATKCVSEEIQSNVVVIGDYSV 56
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Frame = +1
Query: 235 QGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLD 414
+ RV + G+ L + V G F+F + CF + P R D
Sbjct: 82 ESHRVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWA--PDHRPTATVGFEFD 139
Query: 415 IKIGIEAKTYEGIGEAAKLKPMEVELKRLARPIRS-YRSRFHTNEEKRRRNERYQ*INE* 591
+ G+ A+ + + + ++ MEVELK+L I S + F+ + E + N
Sbjct: 140 WRSGVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSR 199
Query: 592 *SFILPYILDGVPLGVWATWQVLYLRRFFK 681
++ L + + L V A Q+ +L+ FF+
Sbjct: 200 MAW-LGFFSLAICLSV-AGLQLWHLKNFFE 227
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 503 QDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFRIFSMA-CLLGSG 643
+D +I ++ +R REEEM++ N TN+R+ + FS+A CL +G
Sbjct: 169 EDTINSIHEEMFYLRAREEEMQELNRRTNSRMAWLGFFSLAICLSVAG 216
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Frame = +1
Query: 97 LVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYI------ 258
L L L + +A+ L+ KC E + +NV+V G+YD+ G I
Sbjct: 8 LALALWCLVADGEAVWMELSTTATKCFSERIQSNVVVIGDYDIL-FDGYPTRPILSIQVI 66
Query: 259 ------IKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCF 360
+ G +L ++ V +G+FSF T ++ CF
Sbjct: 67 LGLLLQVTSPYGKVLHHREKVMQGQFSFNTAEPGVYLACF 106
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 515 EAIVQDFTLMRKREEEMRDTNESTNNRVLFFRIFSMACLLGS 640
E++ + ++ RE R TNEST RV+F+ I +G+
Sbjct: 148 ESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAFMGA 189
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 31.9 bits (69), Expect = 0.49
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Frame = +1
Query: 247 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 426
VD ++KD G + T KF F+ + + CF +K P V D+ +G
Sbjct: 67 VDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH-----ETVDFDVHVG 121
Query: 427 IEAKTYEGIGEAAKLKPMEVELKRLARPIRSYRSRFHTNEEKRRRNERYQ*INE**S--F 600
++ + P+ ++ +L + + + H E + +R +NE S
Sbjct: 122 -HFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLE---AQTDRQAILNENMSRRA 177
Query: 601 ILPYILDGVPLGVWATWQVLYLRRFFK 681
+ +L+ L + QV LRR F+
Sbjct: 178 VHKALLESAALIAASVIQVYLLRRLFE 204
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 474 LQFCSLPDPFISLCFYADFNI*AYLMWNTSSF*WYFRYKANFKHIIIL 331
L C + S Y+ FN+ + L W + S W+ +N+++I++L
Sbjct: 647 LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRWWMGELSNYEYILVL 694
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 469 LKPMEVELKRLARPIRSYRSRFHTNEEKRRRNE 567
+KP E+ L+R+ARP S SR E+RRR E
Sbjct: 1 MKPREL-LERIARPFSSSSSRRGGGAERRRREE 32
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 160 NTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGK 315
+T +KEE+ VLV GE V IQ ++ D + HI K + K
Sbjct: 294 HTSVSMKEEVSTAVLVNGENVVEHIQAKQTDKYFDQQQKHIKDLKSNLATMK 345
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 304 TKGKFSFVTENYDMFEVCFISKVPSE 381
T+G+F + ENYD++ C VP +
Sbjct: 585 TRGRFRSMKENYDLYVACIDETVPEK 610
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 247 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVP 375
VD +++D G+ + KF F+ + CF +K P
Sbjct: 66 VDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNKSP 108
>07_03_1124 +
24157441-24157483,24157989-24158020,24158135-24158353,
24158553-24158634,24158726-24158898
Length = 182
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 TINMEVQYLVLLLSLIWHGTDAIMWSLAPNTHKCLKEELH-ANVLVAGEYDVTEIQGQ 243
T+ M LVL L+++WH + + L H C + L+ A + AG D + G+
Sbjct: 84 TVGMVHLVLVLHLTMLWHMEERVDNLLHRGGHLCRDQSLNDAEAIEAGWLDCLRVVGR 141
>07_03_1551 + 27646445-27647096,27647229-27647374
Length = 265
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = -1
Query: 236 CISVTSYSPATNTLACNSSFKHLCVFGAKLHIIASVPCQIKLSNNTRY 93
C+ + +PA + +A + ++ +C+FG K +I ++L Y
Sbjct: 192 CLQSSRQTPARDGIAAAAIYRSMCIFGLKTILIPYRTNLVRLQTGPNY 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,559,310
Number of Sequences: 37544
Number of extensions: 369435
Number of successful extensions: 876
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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