Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4018
         (480 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60520-1|AAC50645.1|  496|Homo sapiens apoptotic cysteine protea...    29   8.5  
AF009620-1|AAB70913.1|  464|Homo sapiens apoptotic caspase Mch5-...    29   8.5  
AB038985-1|BAB32555.1|  496|Homo sapiens caspase-8 protein.            29   8.5  

>U60520-1|AAC50645.1|  496|Homo sapiens apoptotic cysteine protease
           Mch5 isoform alpha protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 374 EELQVKIQGVHMCVVQSIFEHSTIYNLMKLTTM 276
           EEL  +I+  H C V+ I+E   IY LM  + M
Sbjct: 292 EELHFEIKPHHDCTVEQIYEILKIYQLMDHSNM 324


>AF009620-1|AAB70913.1|  464|Homo sapiens apoptotic caspase
           Mch5-beta protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 374 EELQVKIQGVHMCVVQSIFEHSTIYNLMKLTTM 276
           EEL  +I+  H C V+ I+E   IY LM  + M
Sbjct: 260 EELHFEIKPHHDCTVEQIYEILKIYQLMDHSNM 292


>AB038985-1|BAB32555.1|  496|Homo sapiens caspase-8 protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 374 EELQVKIQGVHMCVVQSIFEHSTIYNLMKLTTM 276
           EEL  +I+  H C V+ I+E   IY LM  + M
Sbjct: 292 EELHFEIKPHHDCTVEQIYEILKIYQLMDHSNM 324


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,932,632
Number of Sequences: 237096
Number of extensions: 1208655
Number of successful extensions: 1994
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)