Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4015
         (324 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   4.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   4.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   6.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   8.6  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   8.6  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
          protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 90 NCSCHDWFELLSD 52
          +C+C D  +LLSD
Sbjct: 61 SCACPDGLKLLSD 73


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
          protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 90 NCSCHDWFELLSD 52
          +C+C D  +LLSD
Sbjct: 61 SCACPDGLKLLSD 73


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 140 FTPIE*MFTVQGSSLEISKFQQSDNPSRLDLDL 238
           F P E    ++G+S  ++ ++  D    L LDL
Sbjct: 652 FLPKEFPANIEGTSYFLNDYKHKDVDVTLPLDL 684


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 66  ELLSDQRVTCFMKPLTI 16
           E   D+R+ C+MK + I
Sbjct: 61  EFPQDERLMCYMKCIMI 77


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding
          protein protein.
          Length = 120

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 66 ELLSDQRVTCFMKPLTI 16
          E   D+R+ C+MK + I
Sbjct: 35 EFPQDERLMCYMKCIMI 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,572
Number of Sequences: 438
Number of extensions: 999
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)