Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4009
         (588 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p...    34   0.43 
BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p...    34   0.43 
BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p...    34   0.43 
AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p...    34   0.43 
AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.     34   0.43 
BC064028-1|AAH64028.1|  237|Homo sapiens immediate early respons...    30   7.0  
AL158151-18|CAI12875.1|  404|Homo sapiens immediate early respon...    30   7.0  

>EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating
            protein protein.
          Length = 2087

 Score = 33.9 bits (74), Expect = 0.43
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 164  IPEWVRNPAILPIARAASNSVPKYPADFPAALCP 265
            +PE VR+ A +P+    + SVP +P  FPA L P
Sbjct: 1382 LPEKVRDGARVPLLHLRAESVPAHPCGFPAPLPP 1415


>BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating
            protein protein.
          Length = 1738

 Score = 33.9 bits (74), Expect = 0.43
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 164  IPEWVRNPAILPIARAASNSVPKYPADFPAALCP 265
            +PE VR+ A +P+    + SVP +P  FPA L P
Sbjct: 1033 LPEKVRDGARVPLLHLRAESVPAHPCGFPAPLPP 1066


>BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating
            protein protein.
          Length = 1738

 Score = 33.9 bits (74), Expect = 0.43
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 164  IPEWVRNPAILPIARAASNSVPKYPADFPAALCP 265
            +PE VR+ A +P+    + SVP +P  FPA L P
Sbjct: 1033 LPEKVRDGARVPLLHLRAESVPAHPCGFPAPLPP 1066


>AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating
            protein protein.
          Length = 1738

 Score = 33.9 bits (74), Expect = 0.43
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 164  IPEWVRNPAILPIARAASNSVPKYPADFPAALCP 265
            +PE VR+ A +P+    + SVP +P  FPA L P
Sbjct: 1033 LPEKVRDGARVPLLHLRAESVPAHPCGFPAPLPP 1066


>AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.
          Length = 1770

 Score = 33.9 bits (74), Expect = 0.43
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +2

Query: 164  IPEWVRNPAILPIARAASNSVPKYPADFPAALCP 265
            +PE VR+ A +P+    + SVP +P  FPA L P
Sbjct: 1065 LPEKVRDGARVPLLHLRAESVPAHPCGFPAPLPP 1098


>BC064028-1|AAH64028.1|  237|Homo sapiens immediate early response
           5-like protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 131 PSLSTPHRGMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYP 274
           P    PHRG P+      PA LP+           P   PAALCP  P
Sbjct: 164 PPHGAPHRGQPLEPLQPGPAPLPL---------PLPPPAPAALCPRDP 202


>AL158151-18|CAI12875.1|  404|Homo sapiens immediate early response
           5-like protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 131 PSLSTPHRGMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYP 274
           P    PHRG P+      PA LP+           P   PAALCP  P
Sbjct: 164 PPHGAPHRGQPLEPLQPGPAPLPL---------PLPPPAPAALCPRDP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,979,456
Number of Sequences: 237096
Number of extensions: 2414872
Number of successful extensions: 13045
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13043
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)