Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4007
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 168 1e-41
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 168 1e-41
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 168 1e-41
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 168 1e-41
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 133 4e-31
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 120 3e-27
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 29 8.5
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 29 8.5
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 8.5
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 29 8.5
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 168 bits (409), Expect = 1e-41
Identities = 74/89 (83%), Positives = 83/89 (93%)
Frame = +1
Query: 1 PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 180
P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 40 PRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKN 99
Query: 181 AIVVVDATPFRQWYESHYTLPLGRKEGSE 267
IV++D+TP+RQWYESHY LPLGRK+G++
Sbjct: 100 CIVLIDSTPYRQWYESHYALPLGRKKGAK 128
Score = 133 bits (322), Expect = 4e-31
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG KKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 168 bits (409), Expect = 1e-41
Identities = 74/89 (83%), Positives = 83/89 (93%)
Frame = +1
Query: 1 PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 180
P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 40 PRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKN 99
Query: 181 AIVVVDATPFRQWYESHYTLPLGRKEGSE 267
IV++D+TP+RQWYESHY LPLGRK+G++
Sbjct: 100 CIVLIDSTPYRQWYESHYALPLGRKKGAK 128
Score = 133 bits (322), Expect = 4e-31
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG KKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 168 bits (409), Expect = 1e-41
Identities = 74/89 (83%), Positives = 83/89 (93%)
Frame = +1
Query: 1 PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 180
P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 40 PRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKN 99
Query: 181 AIVVVDATPFRQWYESHYTLPLGRKEGSE 267
IV++D+TP+RQWYESHY LPLGRK+G++
Sbjct: 100 CIVLIDSTPYRQWYESHYALPLGRKKGAK 128
Score = 133 bits (322), Expect = 4e-31
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG KKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 168 bits (409), Expect = 1e-41
Identities = 74/89 (83%), Positives = 83/89 (93%)
Frame = +1
Query: 1 PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 180
P+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 40 PRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKN 99
Query: 181 AIVVVDATPFRQWYESHYTLPLGRKEGSE 267
IV++D+TP+RQWYESHY LPLGRK+G++
Sbjct: 100 CIVLIDSTPYRQWYESHYALPLGRKKGAK 128
Score = 133 bits (322), Expect = 4e-31
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG KKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 133 bits (322), Expect = 4e-31
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG KKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPG
Sbjct: 101 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 160
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 QCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 110 bits (264), Expect = 4e-24
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +1
Query: 4 QRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNA 183
+R + + NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 24 KRKYELGRPAANTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
Query: 184 IVVVDATPFRQWYESHYTLPLGRKEGSE 267
IV++D+TP+RQWYESHY LPLGRK+G++
Sbjct: 81 IVLIDSTPYRQWYESHYALPLGRKKGAK 108
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 120 bits (289), Expect = 3e-27
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +2
Query: 269 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGY 448
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 449 ILEGKELEFYLRKIKSKRAK 508
+LEGKELEFYLRKIK+++ K
Sbjct: 61 VLEGKELEFYLRKIKARKGK 80
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 417 RLATQASKRPVWNCSSRAPSTL 352
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 417 RLATQASKRPVWNCSSRAPSTL 352
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 113 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 15
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 417 RLATQASKRPVWNCSSRAPSTL 352
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,368,339
Number of Sequences: 237096
Number of extensions: 1490452
Number of successful extensions: 3509
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3509
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -