Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4007
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 175 2e-46
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 24 1.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 24 1.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 3.7
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 22 3.7
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 22 3.7
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.9
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.9
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 6.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 6.4
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 6.4
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 6.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 8.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.5
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.5
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 175 bits (427), Expect = 2e-46
Identities = 78/89 (87%), Positives = 84/89 (94%)
Frame = +1
Query: 1 PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 180
PQRIH+VR+RGGN KYRALRLDTGNFSWGSEC+TRKTRIIDVVYNASNNELVRTKTLVKN
Sbjct: 40 PQRIHTVRTRGGNKKYRALRLDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKN 99
Query: 181 AIVVVDATPFRQWYESHYTLPLGRKEGSE 267
AIV +DATPFRQWYE HY LPLGRK G++
Sbjct: 100 AIVTIDATPFRQWYEGHYVLPLGRKRGAK 128
Score = 146 bits (355), Expect = 1e-37
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +2
Query: 245 LGGKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 424
LG K+GAKLTEAEE ++NKKRS+K KY ARQR AKVE ALEEQF TGR+LAC++SRPG
Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPG 180
Query: 425 QCGRADGYILEGKELEFYLRKIKSKRAK 508
QCGR DGYILEGKELEFY+R+IKSK+AK
Sbjct: 181 QCGREDGYILEGKELEFYMRRIKSKKAK 208
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 192 YNNCILDKGLCT 157
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/64 (20%), Positives = 28/64 (43%)
Frame = +2
Query: 155 CVQRPLSRXXXXXXXXXHSGSGMSRITRCLLGGKKGAKLTEAEEAIINKKRSQKTARKYL 334
C+ R + R + +G + + KKG+ +T+ +I + ++K ++Y
Sbjct: 484 CINRVVQRGTKMQFCIFRTANGRGWGVKTMKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543
Query: 335 ARQR 346
A R
Sbjct: 544 AAGR 547
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 192 YNNCILDKGLCT 157
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 172 VKNAIVVVDATPFRQWYESHYTLPLGRKEGSETD 273
V +A V TP ++ ++ HY +P + G +T+
Sbjct: 188 VTSACVGSAYTPLKEDHDDHYGVPTLEELGFDTE 221
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 192 YNNCILDKGLCTHQ 151
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 192 YNNCILDKGLCTHQ 151
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 225 LIPLPEWSCIYYNNC 181
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 192 YNNCILDKGLCT 157
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 239 CLLGGKKGAKLTEAEEAIINKKRSQKTAR 325
CL G + K + E A +KR +K AR
Sbjct: 432 CLAGDESFRKRRQREAAGNCRKRGEKIAR 460
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 103 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 216
RK + +VVY N + + V + I ++ A+P ++
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 192 YNNCILDKGLCT 157
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 192 YNNCILDKGLCT 157
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,894
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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