Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4005
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 34 0.095
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 31 0.88
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 31 0.88
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 31 0.88
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 30 2.0
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 30 2.0
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 30 2.0
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81548-3|CAO82041.1| 239|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81548-2|CAO82040.1| 260|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 29 3.6
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 29 3.6
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 28 6.2
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 28 6.2
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +3
Query: 102 SGCAEGSDPTACIKYKVMSLLDSIFKKDTFQISDVVEVTKNGAGNDVTGRSTGDFFDGVE 281
+ C E + C K+ ++ ++++ F + +E+ +G VT R+ +
Sbjct: 336 TNCLEITIEMGCFKFPTDDMMPKLWEEHQFSLLSFLEMGLSGVTGLVTDRNNNTVANATI 395
Query: 282 NYIQSHDVTFK--------LPIADTQITVSPRNLDNDELTLNVKFNKEGAR 410
+ D+ LP D QITVS R L++D T+ + AR
Sbjct: 396 SVDTGKDIISTEAGEYWRLLPPGDHQITVSARGLESDTFTVTIVPGARAAR 446
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -3
Query: 614 LGKLLAKLEDSQSHGDNEGEERQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDDFLEL 435
LG+ A + +S E +E ++++ L ED DS+ ++ +E+NE +D D +E+
Sbjct: 239 LGQQYANKPEKKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENE-EDYDQSDIEM 297
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -3
Query: 614 LGKLLAKLEDSQSHGDNEGEERQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDDFLEL 435
LG+ A + +S E +E ++++ L ED DS+ ++ +E+NE +D D +E+
Sbjct: 239 LGQQYANKPEKKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENE-EDYDQSDIEM 297
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 677 CVGGVPRTVGSDLRVRVVGRDLGKLLAKLEDSQSHGDNEGEERQLKSVPS-LQTEDTDSQ 501
CV VP G+ R + + A++E + DN G E S ++E
Sbjct: 1509 CVA-VPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEHGSEN 1567
Query: 500 GDEGHGLEQNEHQDGDDD 447
G+ G+G ++ D DDD
Sbjct: 1568 GESGNG--SDDEDDDDDD 1583
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 677 CVGGVPRTVGSDLRVRVVGRDLGKLLAKLEDSQSHGDNEGEERQLKSVPS-LQTEDTDSQ 501
CV VP G+ R + + A++E + DN G E S ++E
Sbjct: 1547 CVA-VPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEHGSEN 1605
Query: 500 GDEGHGLEQNEHQDGDDD 447
G+ G+G ++ D DDD
Sbjct: 1606 GESGNG--SDDEDDDDDD 1621
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 677 CVGGVPRTVGSDLRVRVVGRDLGKLLAKLEDSQSHGDNEGEERQLKSVPS-LQTEDTDSQ 501
CV VP G+ R + + A++E + DN G E S ++E
Sbjct: 1509 CVA-VPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEHGSEN 1567
Query: 500 GDEGHGLEQNEHQDGDDD 447
G+ G+G ++ D DDD
Sbjct: 1568 GESGNG--SDDEDDDDDD 1583
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 668 GVPRTVGSDLRVRVVGR---DLGKLL--AKLEDSQSHGDNEGEERQLKSVPSLQTEDTDS 504
G RT G+ R + V + DLG+ + ++ED+ + K+ D
Sbjct: 546 GGRRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAPSDRDGSPADM 605
Query: 503 QGDEGHGLEQNEHQDGDDD 447
+GD G +Q+ QD D D
Sbjct: 606 EGDSPEGQDQDADQDQDQD 624
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 668 GVPRTVGSDLRVRVVGR---DLGKLL--AKLEDSQSHGDNEGEERQLKSVPSLQTEDTDS 504
G RT G+ R + V + DLG+ + ++ED+ + K+ D
Sbjct: 546 GGRRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAPSDRDGSPADM 605
Query: 503 QGDEGHGLEQNEHQDGDDD 447
+GD G +Q+ QD D D
Sbjct: 606 EGDSPEGQDQDADQDQDQD 624
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -3
Query: 668 GVPRTVGSDLRVRVVGR---DLGKLL--AKLEDSQSHGDNEGEERQLKSVPSLQTEDTDS 504
G RT G+ R + V + DLG+ + ++ED+ + K+ D
Sbjct: 546 GGRRTGGAVTRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAPSDRDGSPADM 605
Query: 503 QGDEGHGLEQNEHQDGDDD 447
+GD G +Q+ QD D D
Sbjct: 606 EGDSPEGQDQDADQDQDQD 624
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 590 EDSQSHGDNEGEE-RQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDDFLEL 435
E S S D+ EE ++ + V L T D DSQ + EH++ +DFLEL
Sbjct: 780 ETSSSETDDVMEEAKEPEDVLLLSTSDPDSQRRGAQSVGVEEHEE-TEDFLEL 831
>AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical
protein Y77E11A.7a protein.
Length = 605
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 222 NGAGNDVTGRSTGDFFDGVENYIQSHDVTFKLPIADTQITVSPRNLDNDELTLNVKFNKE 401
+G + V G S F+G E YI + + + ++T P + N E + +VK+N+
Sbjct: 523 DGGHHHVVGNSGKPRFEG-ERYIFDGEEYVEEEVIAEELTEVPASSANGEQSDDVKYNER 581
Query: 402 GARS 413
GA++
Sbjct: 582 GAQA 585
>AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical
protein Y77E11A.7b protein.
Length = 603
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 222 NGAGNDVTGRSTGDFFDGVENYIQSHDVTFKLPIADTQITVSPRNLDNDELTLNVKFNKE 401
+G + V G S F+G E YI + + + ++T P + N E + +VK+N+
Sbjct: 521 DGGHHHVVGNSGKPRFEG-ERYIFDGEEYVEEEVIAEELTEVPASSANGEQSDDVKYNER 579
Query: 402 GARS 413
GA++
Sbjct: 580 GAQA 583
>AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical
protein Y77E11A.7c protein.
Length = 577
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 222 NGAGNDVTGRSTGDFFDGVENYIQSHDVTFKLPIADTQITVSPRNLDNDELTLNVKFNKE 401
+G + V G S F+G E YI + + + ++T P + N E + +VK+N+
Sbjct: 495 DGGHHHVVGNSGKPRFEG-ERYIFDGEEYVEEEVIAEELTEVPASSANGEQSDDVKYNER 553
Query: 402 GARS 413
GA++
Sbjct: 554 GAQA 557
>Z81548-3|CAO82041.1| 239|Caenorhabditis elegans Hypothetical
protein F54F12.2b protein.
Length = 239
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 444 KIIVPILVFVLLKAMTLIPLAIGVLG 521
+I+V +LV ++ A+TLI LA+GV G
Sbjct: 165 QIVVGLLVALIYVAVTLISLAVGVFG 190
>Z81548-2|CAO82040.1| 260|Caenorhabditis elegans Hypothetical
protein F54F12.2a protein.
Length = 260
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 444 KIIVPILVFVLLKAMTLIPLAIGVLG 521
+I+V +LV ++ A+TLI LA+GV G
Sbjct: 186 QIVVGLLVALIYVAVTLISLAVGVFG 211
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 608 KLLAKLEDSQSHGDNE---GEERQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDD 447
+LL+ + ++ DNE G+ R+ S +D D D+ E ++ D DDD
Sbjct: 1663 RLLSGNTTNDTNEDNEERNGQPREFDGESSSSDDDNDDDDDDDDEEEDDDDDDDDDD 1719
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 599 AKLEDSQSHGDNEGEERQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDD 447
+K D H + EGE + S P + E D + E+N+ D+D
Sbjct: 35 SKSRDGSHHNEEEGETSKA-SDPQINEESEDETSNASDEQEENDDTSSDED 84
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 608 KLLAKLEDSQSHGDNE---GEERQLKSVPSLQTEDTDSQGDEGHGLEQNEHQDGDDD 447
+LL+ + ++ DNE G+ R+ S +D D D+ E ++ D DDD
Sbjct: 1663 RLLSGNTTNDTNEDNEERNGQPREFDGESSSSDDDNDDDDDDDDEEEDDDDDDDDDD 1719
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 602 LAKLEDSQSHGDNEGEERQLKSVPSLQTEDTDSQGDEGHGL---EQNEHQDGDDD 447
+ K ++ + GDNEG++ + K E+ + GD+ E +E +D + D
Sbjct: 399 VVKEDEEKKEGDNEGDKEEDKEDKKESEEEEEKDGDDEETTTTSEDDEEKDSNSD 453
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 602 LAKLEDSQSHGDNEGEERQLKSVPSLQTEDTDSQGDEGHGL---EQNEHQDGDDD 447
+ K ++ + GDNEG++ + K E+ + GD+ E +E +D + D
Sbjct: 399 VVKEDEEKKEGDNEGDKEEDKEDKKESEEEEEKDGDDEETTTTSEDDEEKDSNSD 453
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 530 SLQTEDTDSQGDEGHGLEQNEHQDGDDDF 444
S +ED+DS D H Q + Q DDF
Sbjct: 453 SSSSEDSDSPSDSPHSRRQRKRQSEGDDF 481
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 530 SLQTEDTDSQGDEGHGLEQNEHQDGDDDF 444
S +ED+DS D H Q + Q DDF
Sbjct: 453 SSSSEDSDSPSDSPHSRRQRKRQSEGDDF 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,665
Number of Sequences: 27780
Number of extensions: 367062
Number of successful extensions: 1484
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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