Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4005
(757 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 1.3
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.4
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 462 LVFVLLKAMTLIPLAIGVLGLKAWNALQLSFFSFVVSVALA 584
L+ V++ +TL + +L + ALQ F+VS+A+A
Sbjct: 191 LILVIVPCLTLFGNVLVILAVVRERALQTVTNYFIVSLAVA 231
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 513 VLGLKAWNALQLSFFSFVVSVALAIF 590
+LG++ + L+F+SF+VS L F
Sbjct: 382 LLGIQCLTVVCLAFWSFIVSTILLWF 407
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 443 LELSFACFSN*TSAFLVELD 384
LE +F C N +AFL LD
Sbjct: 156 LERAFRCLGNNLTAFLTTLD 175
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 208 ISSMALLGFTLPPDSG 223
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 276 ISSMALLGFTLPPDSG 291
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 728 ISWGELLGFSLPPVAG 681
IS LLGF+LPP +G
Sbjct: 276 ISSMALLGFTLPPDSG 291
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 125 PNCLHKIQGHV 157
P+C+H++ GH+
Sbjct: 334 PDCIHELLGHM 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,192
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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