Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4002
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075191-1|AAL68060.1|  623|Drosophila melanogaster AT13424p pro...    29   7.8  
AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA...    29   7.8  

>AY075191-1|AAL68060.1|  623|Drosophila melanogaster AT13424p
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 635 HEPKQEPCFAESTTGSETRPTEKIR-RETQWTITEASILQNMNTTLCHDFEVSICESCIA 459
           HE +++ C +     ++  PT  +  R+T  T++  S L ++N     + +  I +SC A
Sbjct: 159 HENQRQSCVSFEEPAAKDIPTFDLHFRDTSCTVSHDSSLSSINVCYSQEQQRDITKSCPA 218

Query: 458 KS 453
           ++
Sbjct: 219 QT 220


>AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -2

Query: 635 HEPKQEPCFAESTTGSETRPTEKIR-RETQWTITEASILQNMNTTLCHDFEVSICESCIA 459
           HE +++ C +     ++  PT  +  R+T  T++  S L ++N     + +  I +SC A
Sbjct: 158 HENQRQSCVSFEEPAAKDIPTFDLHFRDTSCTVSHDSSLSSINVCYSQEQQRDITKSCPA 217

Query: 458 KS 453
           ++
Sbjct: 218 QT 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,292,103
Number of Sequences: 53049
Number of extensions: 651725
Number of successful extensions: 1378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)