Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3997
(531 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 189 1e-48
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 182 2e-46
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 173 1e-43
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 145 9e-43
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 5e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.19
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.44
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 0.76
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 1.8
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 2.3
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 2.3
11_06_0437 - 23533218-23536382 29 3.1
05_01_0297 - 2314687-2316021 29 3.1
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 28 4.1
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 4.1
10_01_0357 - 3928646-3928954 28 5.4
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 5.4
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 28 5.4
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 5.4
11_04_0228 + 15105752-15105921,15106774-15106919,15107369-151074... 27 7.1
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 27 7.1
07_01_0200 + 1433859-1434377 27 7.1
07_01_0196 + 1400708-1401226 27 7.1
07_01_0192 + 1367558-1368076 27 7.1
07_01_0188 + 1334405-1334923 27 7.1
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 7.1
02_05_0664 + 30717551-30719491 27 7.1
02_04_0612 + 24370446-24373044,24373135-24373541 27 7.1
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 27 7.1
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 27 9.4
11_01_0232 + 1794081-1795175,1796087-1796782 27 9.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 9.4
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 9.4
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 189 bits (460), Expect = 1e-48
Identities = 82/143 (57%), Positives = 113/143 (79%), Gaps = 2/143 (1%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIFNGKK E
Sbjct: 14 DAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLE 73
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDF- 415
DI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P D L Q++ F
Sbjct: 74 DIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDDTLTNQIKNGFG 133
Query: 416 DSGKELLCTVLKSCGEECVIAVK 484
+ GK+++ TV+ + GEE + AVK
Sbjct: 134 EEGKDMILTVMSAMGEEQICAVK 156
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 182 bits (442), Expect = 2e-46
Identities = 81/146 (55%), Positives = 112/146 (76%), Gaps = 5/146 (3%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGHAKVHLVGIDIFNG 229
D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGHAK H V IDIFNG
Sbjct: 27 DAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGHAKCHFVAIDIFNG 86
Query: 230 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLR 406
KK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL++P D L Q++
Sbjct: 87 KKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDSLLGQIK 146
Query: 407 TDFDSGKELLCTVLKSCGEECVIAVK 484
T F GK+L+ TV+ + GEE + A+K
Sbjct: 147 TGFGEGKDLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 173 bits (420), Expect = 1e-43
Identities = 82/155 (52%), Positives = 110/155 (70%), Gaps = 14/155 (9%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMSTSKTGKHGHAKVH 202
D+GAS T+P Q +RKNG +++K RPCK +VE+STSKTGKHGHAK H
Sbjct: 1336 DAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVSTSKTGKHGHAKCH 1395
Query: 203 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 379
V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G ++DL++P
Sbjct: 1396 FVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPS 1455
Query: 380 DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 484
D L TQ++ F GK+L+ TV+ + GEE + A+K
Sbjct: 1456 DEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 145 bits (351), Expect(2) = 9e-43
Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = +2
Query: 146 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 325
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 326 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 484
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+K
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
Score = 46.0 bits (104), Expect(2) = 9e-43
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCK 148
D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 14 DAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +2
Query: 278 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 451
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 452 SCG 460
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 66 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 179
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +2
Query: 341 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 496
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 269 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 388
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = -3
Query: 466 LLTAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFA 287
++ AG H ++ FLA ++ T + +E +++ VL+ +T ++ V D L V
Sbjct: 1035 MVEAGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV-- 1087
Query: 286 LHVGYVHVVCGGTDIFILFTIEDINPNQVNFSVA 185
VG+ V+ G +++ DI+ N SVA
Sbjct: 1088 --VGFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 347 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 490
N D D I G GTQ D +L +VLKS + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 377 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 463
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 188 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 325
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 302 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 460
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 378 RMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSPSKQTQPL 500
R+++S S L AA CC N +RS S+ ++ +PL
Sbjct: 1360 RILSSDSSAELKGDAAELCCVLFANTRIRSTSAAARCVEPL 1400
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 292 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 140
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
>10_01_0357 - 3928646-3928954
Length = 102
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 339 WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 479
W ++ + V SA T+ A C PC NP RS P
Sbjct: 3 WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 128 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 247
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Frame = -1
Query: 231 LPLKISIPTK*TLAWPCFPVLDVDISTILHGRPFSITKPFLRRAEH--CM---GKVAEAP 67
L L +++PT+ + VL D+STI + P +TK F+ R+ C+ GK +
Sbjct: 204 LQLALNVPTEESSLTFGDRVLKNDLSTIRNDSPLLLTKTFMHRSSSTPCLSPTGKDIQQQ 263
Query: 66 ESXG----LKVCVLRC 31
G L VC RC
Sbjct: 264 RDRGGPIELLVCPSRC 279
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +2
Query: 242 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 412
D CP T D V++ + TD +M G + GDLG+ RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292
Query: 413 FDSGKE 430
SGKE
Sbjct: 293 AASGKE 298
>11_04_0228 +
15105752-15105921,15106774-15106919,15107369-15107448,
15107598-15107720,15107814-15107906
Length = 203
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 292 FALHVGYVHV-VCGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLA 143
F+L GYV V G +F F + NP+ + + G GC + LA
Sbjct: 52 FSLETGYVEVNESTGVQLFYYFVRSEKNPDLDPLLLWLTGGPGCSSISGLA 102
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = +3
Query: 54 DRXTPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLISSMVK 233
D P P P SP + R T S AR P P +T T L L +
Sbjct: 527 DGRIPSPSPQSPVSARTSSATPSPT-----ARTPSPAPPSPIATKTSTSVVLSLAAVRAT 581
Query: 234 SMKISVPPHTTWTYP 278
S S PP T + P
Sbjct: 582 SPATSSPPRATSSLP 596
>07_01_0200 + 1433859-1434377
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 495 AVFALTAMTHSSPQDFSTVHNNS 427
A+ A TA SSPQDF HN++
Sbjct: 17 AMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0196 + 1400708-1401226
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 495 AVFALTAMTHSSPQDFSTVHNNS 427
A+ A TA SSPQDF HN++
Sbjct: 17 AMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0192 + 1367558-1368076
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 495 AVFALTAMTHSSPQDFSTVHNNS 427
A+ A TA SSPQDF HN++
Sbjct: 17 AMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0188 + 1334405-1334923
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 495 AVFALTAMTHSSPQDFSTVHNNS 427
A+ A TA SSPQDF HN++
Sbjct: 17 AMAASTAAAQSSPQDFVDAHNDA 39
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 239 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED--LKIPDGDLGTQLRTD 412
E+I P+ + MD+ + E Y + I+++ + GD+ + L +P+ +L +
Sbjct: 571 EEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESK 630
Query: 413 FDS 421
DS
Sbjct: 631 SDS 633
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 182 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 283
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>02_04_0612 + 24370446-24373044,24373135-24373541
Length = 1001
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -3
Query: 334 GQVAIIRDISQLVVFALHVGYVHVVCGGTDIFILFTIEDINPNQVNFS---VAVLSGFGC 164
G++ + + IS V A + Y+H CG T I D+ P+ + + A+L FG
Sbjct: 783 GRLGLRQTISICVNIADALDYLHHECGRTTIHC-----DLKPSNILLADDMNALLGDFGI 837
Query: 163 GHFNNLAW-TTLQHNETVFTQG 101
F +W T+ N TV +G
Sbjct: 838 ARFYIDSWSTSTGSNSTVGVKG 859
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 32 HRXTHTLRPXDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 163
HR T P +ATFPM L N + +GR CK V +S
Sbjct: 443 HRGTSIFLP-----TATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 98 NIAWGRWLRPRSLPVSKCV 42
++A G W RPR+LP CV
Sbjct: 272 HVASGAWARPRALPGGGCV 290
>11_01_0232 + 1794081-1795175,1796087-1796782
Length = 596
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 98 NIAWGRWLRPRSLPVSKCV 42
++A G W RPR+LP CV
Sbjct: 272 HVASGTWARPRALPGGGCV 290
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 311 ISDDGYLTLMADNGDLREDLKIP 379
+ DDG + M NGD RE LK P
Sbjct: 92 VKDDGVINSMTRNGDRRELLKGP 114
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 310 ISQLVVFALHVGYVHVVCGGTD-IFILFTIEDINPNQ 203
IS L+ F G VH+V GG+D + IL++ + I+ ++
Sbjct: 126 ISCLMTFMSAAGEVHLVSGGSDGLLILWSADHIHDSR 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,746
Number of Sequences: 37544
Number of extensions: 364288
Number of successful extensions: 1206
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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