Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3997
(531 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 271 3e-73
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 270 1e-72
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 270 1e-72
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 270 1e-72
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 270 1e-72
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 30 1.7
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 30 1.7
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 30 1.7
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 30 1.7
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 28 9.1
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 9.1
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 9.1
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 9.1
AE014134-1066|AAF52356.2| 808|Drosophila melanogaster CG31640-P... 28 9.1
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 9.1
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 9.1
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 9.1
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 271 bits (665), Expect = 3e-73
Identities = 122/145 (84%), Positives = 134/145 (92%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYE
Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYE 71
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 421
DICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+LG QLR DFDS
Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDFDS 131
Query: 422 GKELLCTVLKSCGEECVIAVKANTA 496
GK+LLCTVLK+CGEECVIA+K NTA
Sbjct: 132 GKDLLCTVLKACGEECVIAIKTNTA 156
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 270 bits (661), Expect = 1e-72
Identities = 121/145 (83%), Positives = 134/145 (92%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYE
Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYE 71
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 421
DICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDS
Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDS 131
Query: 422 GKELLCTVLKSCGEECVIAVKANTA 496
GK+LLCTVLK+CGEECVIA+K NTA
Sbjct: 132 GKDLLCTVLKACGEECVIAIKTNTA 156
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 270 bits (661), Expect = 1e-72
Identities = 121/145 (83%), Positives = 134/145 (92%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYE
Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYE 71
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 421
DICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDS
Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDS 131
Query: 422 GKELLCTVLKSCGEECVIAVKANTA 496
GK+LLCTVLK+CGEECVIA+K NTA
Sbjct: 132 GKDLLCTVLKACGEECVIAIKTNTA 156
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 270 bits (661), Expect = 1e-72
Identities = 121/145 (83%), Positives = 134/145 (92%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYE
Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYE 71
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 421
DICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDS
Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDS 131
Query: 422 GKELLCTVLKSCGEECVIAVKANTA 496
GK+LLCTVLK+CGEECVIA+K NTA
Sbjct: 132 GKDLLCTVLKACGEECVIAIKTNTA 156
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 270 bits (661), Expect = 1e-72
Identities = 121/145 (83%), Positives = 134/145 (92%)
Frame = +2
Query: 62 DSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYE 241
DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYE
Sbjct: 12 DSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYE 71
Query: 242 DICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDS 421
DICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDS
Sbjct: 72 DICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDS 131
Query: 422 GKELLCTVLKSCGEECVIAVKANTA 496
GK+LLCTVLK+CGEECVIA+K NTA
Sbjct: 132 GKDLLCTVLKACGEECVIAIKTNTA 156
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 165 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 278
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 165 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 278
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 165 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 278
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 165 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 278
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 564 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 599
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 1042 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1077
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-1066|AAF52356.2| 808|Drosophila melanogaster CG31640-PA
protein.
Length = 808
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 235 LFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWTTLQHNETVFTQGRTL 92
L+T P ++ + G+GCG + ++ HN + T G+ L
Sbjct: 665 LYTTMPKKPQHLSLVASTAGGYGCGTSSKPKYSLTLHNSKLATGGKHL 712
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 462 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 355
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,189,823
Number of Sequences: 53049
Number of extensions: 606261
Number of successful extensions: 1740
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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