Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3997
(531 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 3.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 3.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 4.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 4.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 4.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 4.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 4.5
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 7.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 7.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.9
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 215 DIFNGKKYEDIC 250
D+ N +KYED+C
Sbjct: 597 DLSNERKYEDVC 608
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 180 FPVLDVDISTILHGR 136
FPVL V I+ +LHG+
Sbjct: 8 FPVLFVIINVLLHGQ 22
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 101 PNIAWGRWLRPRSLPVSKC 45
P I W R +R +P KC
Sbjct: 180 PAIVWWRAVRTEEVPEDKC 198
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 159 CPHPKPESTATLKFTWLGLISSMVKSM 239
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 159 CPHPKPESTATLKFTWLGLISSMVKSM 239
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 412 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 446
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 432 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 334
N L + +R N PSG +RS+ +P+S R
Sbjct: 412 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 446
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 159 CPHPKPESTATLKFTWLGLISSMVKSM 239
CP P TWLG ++S + +
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPL 379
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 4.5
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 365 DLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTASR 502
DLK L Q+R SG + V C+ NTASR
Sbjct: 505 DLKDRSTGLHLQIRVGVHSGAVVAGIVGLKMPRYCLFGDSVNTASR 550
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 487 CFDGDDALLTAGFQHGAQQFLAA 419
C D DD LL G++ AA
Sbjct: 670 CLDDDDTLLEVALSLGSEALSAA 692
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 236 YEDICPSTHNMDV 274
YE PSTH MD+
Sbjct: 46 YERFSPSTHLMDL 58
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 215 DIFNGKKYEDICPSTH 262
+I NGKK +I TH
Sbjct: 44 EIINGKKLTEIINETH 59
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 396 VPRSPSGILRSSRRSPLS 343
VP+S +G+ SSRRS ++
Sbjct: 239 VPKSVAGLNVSSRRSDMN 256
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,974
Number of Sequences: 438
Number of extensions: 3877
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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