Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3996
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79983-1|BAA11478.2|  326|Homo sapiens KIAA0161 protein.               30   5.3  
BC063311-1|AAH63311.1|  302|Homo sapiens IBR domain containing 2...    30   5.3  
BC050373-1|AAH50373.1|  292|Homo sapiens ring finger protein 144...    30   5.3  
AL832329-1|CAD38622.1|  350|Homo sapiens hypothetical protein pr...    30   5.3  
AL138725-3|CAI15148.2|  303|Homo sapiens IBR domain containing 2...    30   5.3  
AC068481-1|AAX82010.1|  292|Homo sapiens unknown protein.              30   5.3  
AB076367-1|BAC02434.1|  303|Homo sapiens p53-inducible RING fing...    30   5.3  

>D79983-1|BAA11478.2|  326|Homo sapiens KIAA0161 protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC++S+D
Sbjct: 235 MMCKNCKHAFCWYCLESLD 253


>BC063311-1|AAH63311.1|  302|Homo sapiens IBR domain containing 2
           protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC+Q++D
Sbjct: 209 MMCKNCKHTFCWYCLQNLD 227


>BC050373-1|AAH50373.1|  292|Homo sapiens ring finger protein 144
           protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC++S+D
Sbjct: 201 MMCKNCKHAFCWYCLESLD 219


>AL832329-1|CAD38622.1|  350|Homo sapiens hypothetical protein
           protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC+Q++D
Sbjct: 256 MMCKNCKHTFCWYCLQNLD 274


>AL138725-3|CAI15148.2|  303|Homo sapiens IBR domain containing 2
           protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC+Q++D
Sbjct: 209 MMCKNCKHTFCWYCLQNLD 227


>AC068481-1|AAX82010.1|  292|Homo sapiens unknown protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC++S+D
Sbjct: 201 MMCKNCKHAFCWYCLESLD 219


>AB076367-1|BAC02434.1|  303|Homo sapiens p53-inducible RING finger
           protein protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 467 LRCTQCIHSISWYCIQSVD 523
           + C  C H+  WYC+Q++D
Sbjct: 209 MMCKNCKHTFCWYCLQNLD 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,457,573
Number of Sequences: 237096
Number of extensions: 1296405
Number of successful extensions: 2085
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2084
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)