Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3996
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB...    30   2.7  
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA...    30   2.7  
BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p pro...    29   6.2  
AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-P...    29   6.2  

>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
            isoform B protein.
          Length = 2347

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 26/85 (30%), Positives = 39/85 (45%)
 Frame = -3

Query: 313  LNKVTLK*PLKALS*DKKEKKRTGAKRVHLKNKTRVKKFIITLIT*VNVTSVLIIFFTEN 134
            ++K  +K  L A    KKEKKR G    ++KN  R K  + T+I       + +I   + 
Sbjct: 1133 IDKYEMK-TLTAAGGRKKEKKRIGELETNIKNLQRAKAKVETVI-------LELIATVKQ 1184

Query: 133  RVVEFIFHKLSAISSQLDRMERISE 59
               EF F  L     QL +M ++ E
Sbjct: 1185 TNSEFKFSYLPTKQQQLAKMAQLEE 1209


>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
            isoform A protein.
          Length = 2451

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 26/85 (30%), Positives = 39/85 (45%)
 Frame = -3

Query: 313  LNKVTLK*PLKALS*DKKEKKRTGAKRVHLKNKTRVKKFIITLIT*VNVTSVLIIFFTEN 134
            ++K  +K  L A    KKEKKR G    ++KN  R K  + T+I       + +I   + 
Sbjct: 1133 IDKYEMK-TLTAAGGRKKEKKRIGELETNIKNLQRAKAKVETVI-------LELIATVKQ 1184

Query: 133  RVVEFIFHKLSAISSQLDRMERISE 59
               EF F  L     QL +M ++ E
Sbjct: 1185 TNSEFKFSYLPTKQQQLAKMAQLEE 1209


>BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 425  PARNTAGCV*G*RPLRCTQCIHSISWYCIQSVD 523
            P     GC      + C +C H   WYC+ S+D
Sbjct: 989  PIEKDEGCA----QMMCKRCKHVFCWYCLASLD 1017


>AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-PA
            protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 425  PARNTAGCV*G*RPLRCTQCIHSISWYCIQSVD 523
            P     GC      + C +C H   WYC+ S+D
Sbjct: 989  PIEKDEGCA----QMMCKRCKHVFCWYCLASLD 1017


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,916,141
Number of Sequences: 53049
Number of extensions: 393380
Number of successful extensions: 905
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)