Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3984
         (482 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.70 
D43947-1|BAA07891.3| 2235|Homo sapiens KIAA0100 protein protein.       29   8.6  
BC120873-1|AAI20874.1| 2092|Homo sapiens KIAA0100 protein protein.     29   8.6  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 422 KKKKKNSRGGPVPNS 466
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>D43947-1|BAA07891.3| 2235|Homo sapiens KIAA0100 protein protein.
          Length = 2235

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -2

Query: 313 VRSQVYLQRLPHPSNRN----ALLLHGRNRQGGGTYPCGLTRGPTTSNYANYNFAGL 155
           V S  ++QR PHP N +    AL+L     QG    P GL+   + + + +    GL
Sbjct: 474 VGSDSHIQRAPHPPNMHVWGEALVLDSFTLQGSYNQPLGLSSTQSDTLFLDCTIRGL 530


>BC120873-1|AAI20874.1| 2092|Homo sapiens KIAA0100 protein protein.
          Length = 2092

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -2

Query: 313 VRSQVYLQRLPHPSNRN----ALLLHGRNRQGGGTYPCGLTRGPTTSNYANYNFAGL 155
           V S  ++QR PHP N +    AL+L     QG    P GL+   + + + +    GL
Sbjct: 331 VGSDSHIQRAPHPPNMHVWGEALVLDSFTLQGSYNQPLGLSSTQSDTLFLDCTIRGL 387


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,840,901
Number of Sequences: 237096
Number of extensions: 1906666
Number of successful extensions: 2550
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)