Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3983
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical p... 28 2.3
AF063007-3|AAC16431.2| 362|Caenorhabditis elegans Hypothetical ... 27 5.3
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 27 5.3
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 26 9.2
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 26 9.2
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 26 9.2
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 26 9.2
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 26 9.2
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 26 9.2
>Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical
protein C08B6.13 protein.
Length = 303
Score = 28.3 bits (60), Expect = 2.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 192 ITYATETFHYGFNVATIFAICK 127
+TYAT F Y FN+ ++ + K
Sbjct: 7 LTYATHLFSYSFNIILLYVVAK 28
>AF063007-3|AAC16431.2| 362|Caenorhabditis elegans Hypothetical
protein R119.2 protein.
Length = 362
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 151 YIESIVKCFGCIGYWKVSQKSLQNNIVF 234
Y+ + +CF G+W +Q SL +++
Sbjct: 193 YVSDVTRCFPISGFWSDAQLSLYEALLY 220
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 242 RFQMGRQKK*GFHEFKLCLIFHIFFASRCVQNKK 343
+FQM + G+H +LCL+ + +RC + +K
Sbjct: 490 QFQMAKDTAGGWHSSQLCLVETMSVLARCPRLRK 523
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 163 IVKCFGCIGYWKVSQKSL 216
+V FGCIG WK++Q +L
Sbjct: 69 LVGYFGCIGAWKMNQCAL 86
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 46 SLQNNPILNQTISNFPP 62
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 46 SLQNNPILNQTISNFPP 62
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 SLQNNIVFNESFSNGPP 261
SLQNN + N++ SN PP
Sbjct: 122 SLQNNPILNQTISNFPP 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,228,842
Number of Sequences: 27780
Number of extensions: 128422
Number of successful extensions: 395
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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