Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3961
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 33 0.12
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 31 0.37
01_01_0957 + 7516314-7517489 31 0.37
12_02_0904 - 24181766-24181809,24181888-24182066,24182424-241824... 30 0.85
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 1.1
07_01_0262 + 1957973-1958220,1958272-1958935 29 2.0
06_02_0201 - 12960493-12960606,12960727-12960853,12961100-129612... 29 2.0
02_01_0085 + 610872-611297 29 2.0
11_06_0692 + 26327487-26328509 29 2.6
05_07_0219 - 28474661-28475146,28475979-28476644 29 2.6
05_03_0474 + 14481063-14481403,14481597-14481710,14483428-144836... 29 2.6
01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533... 29 2.6
09_02_0556 + 10637362-10637575,10637728-10637825 28 3.4
04_03_0716 + 18995712-18995904,18996511-18996614,18997280-189973... 28 3.4
04_03_0314 - 14238620-14240128 28 3.4
12_02_1215 + 27070164-27070302,27070308-27071098 28 4.5
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 28 4.5
10_08_0350 + 17066058-17066235,17067084-17067223 28 4.5
09_02_0074 + 3905810-3905981,3906115-3906175,3906522-3906573,390... 28 4.5
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099... 28 4.5
05_06_0246 + 26656629-26656907,26657001-26657228,26657595-266576... 28 4.5
03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 28 4.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 6.0
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 27 6.0
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 27 6.0
03_01_0528 + 3966687-3967643 27 6.0
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 27 6.0
01_01_0601 - 4476261-4476728 27 6.0
11_06_0215 - 21332429-21333037,21333605-21333649 27 7.9
11_01_0045 + 346817-347168,347582-347713,347790-347968,348654-34... 27 7.9
10_07_0131 + 13258506-13258628,13258737-13258889 27 7.9
08_01_0827 + 8016704-8017150 27 7.9
06_03_1235 + 28593906-28594412,28594670-28594756,28594890-285950... 27 7.9
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 27 7.9
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 27 7.9
04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870 27 7.9
04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514... 27 7.9
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 27 7.9
03_02_0172 - 6131559-6131990 27 7.9
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 367 RGGRRALEAASGRHRRRCP-RNGTPEARPSSHVLEAV 474
R GRRA AA HRRR P R+ PEA P V++ V
Sbjct: 4 REGRRAA-AARAVHRRRLPARSDAPEANPRGQVIQCV 39
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 31.5 bits (68), Expect = 0.37
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 431 PFRGHRRRCRPDAASSAR-LPPRWTGVRCRSGSSLSPSQPFRQ-LESIDLSSKTWVSNP 261
P R H R C P AAS+ + PP R RS SS S S R+ + +I L ++NP
Sbjct: 30 PLRPHVRCCSPAAASTTKPPPPPPQDRRRRSASSSSSSTSDRESIRAIRLKKVLLLANP 88
>01_01_0957 + 7516314-7517489
Length = 391
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 328 LRDDPERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARP 450
++D+P R ++G AA+ R RRR P G PE RP
Sbjct: 180 VKDNPFLMRDRENKGNDGGAAAAAARWRRRDPFEGYPERRP 220
>12_02_0904 -
24181766-24181809,24181888-24182066,24182424-24182464,
24182829-24182860,24183816-24184140
Length = 206
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 340 PERHRTPVHRGGRRALEAASGRHRRRCPRNGTPEARPSSH 459
P HR+P RG A AA+G RC R TP + H
Sbjct: 50 PPLHRSPRRRGQGAAGVAAAGPRGGRCSRRRTPRRGGALH 89
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.9 bits (64), Expect = 1.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 164 NLCVNFVCSDHLICRYA 214
NLC +C +H +CRYA
Sbjct: 467 NLCWKLICMEHAVCRYA 483
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 315 WLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
WLR+ S CP RR+ S ++ S P S AG A +
Sbjct: 85 WLRQASSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARR 130
>06_02_0201 -
12960493-12960606,12960727-12960853,12961100-12961276,
12961864-12961975,12964141-12964144
Length = 177
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 439 PAFHFADIGVDVGRTLLQALVFLLGGQGSGAVRDRL*VRLSHSD 308
P HF D D+GRTL Q +V +L + ++L R+ H +
Sbjct: 102 PTVHFVDEHYDIGRTLAQRVVSMLAND----ILEQLATRVLHEE 141
>02_01_0085 + 610872-611297
Length = 141
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +3
Query: 321 RRTQRRSRTAPDP---CPPRRKTS 383
RR RSR APDP CPP R+ S
Sbjct: 82 RRRSARSRAAPDPPTSCPPSRQIS 105
>11_06_0692 + 26327487-26328509
Length = 340
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 345 TAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 449
TAP P PP+R S S P SA+ G+A+
Sbjct: 237 TAPPPPPPKRSPSPSPSPSPAPAAASARGGRGAAT 271
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 288 QINRLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPR 467
Q+ + ++ W R TAP P PP SA + P +P ++ +A+ + P
Sbjct: 53 QLEKTRMTTWARSVVESFDTAPPPSPP--PLSATTPHPPPPSPATSSSRTATATATATPT 110
Query: 468 S 470
S
Sbjct: 111 S 111
>05_03_0474 +
14481063-14481403,14481597-14481710,14483428-14483676,
14485844-14486225
Length = 361
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 339 SRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRS 470
S ++P P P R+T+ +VRP S P + A S +L+ P S
Sbjct: 16 SSSSPPPPSPGRRTATAFAVRPRSLP-DPPFQAPSRDRLTLPAS 58
>01_06_1089 -
34451982-34452670,34452755-34452814,34453287-34453352,
34454055-34454253,34454470-34454719,34454830-34454898,
34455733-34455804,34456027-34456168,34456544-34457064,
34457166-34457739,34459164-34459269
Length = 915
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 460 HESLDALPAFHFADIG 413
+ SL+ LP FHFADIG
Sbjct: 306 YRSLELLPIFHFADIG 321
>09_02_0556 + 10637362-10637575,10637728-10637825
Length = 103
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 391 AASGRHRRRCPRNGTPEARPSSHVLEAVP 477
A SGRHRRR P P S L +VP
Sbjct: 33 AVSGRHRRRAPATLAVPPLPRSPSLSSVP 61
>04_03_0716 +
18995712-18995904,18996511-18996614,18997280-18997393,
18997819-18997824,18998041-18998097
Length = 157
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 373 GRRALEAASGRHRRRCPRNGTPEARPSSHVLEAVPR 480
GRRA S RH R C G P P VLEA+ +
Sbjct: 31 GRRAPRRRS-RHLRCCSGGGDPGQPPQEAVLEAISK 65
>04_03_0314 - 14238620-14240128
Length = 502
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 473 TASRT*ELGRASGVPFRGHRRRCR-PDAASSARLPPRWTGVRCRSGSSLSPS 321
TAS + L S P H RR R P+ S PP T VRC + +PS
Sbjct: 4 TASSSSSLSFLSPQPI--HPRRVRLPNPPPSTAAPPTPTAVRCTPAPAAAPS 53
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 346 RHRTPVHRGGRRALEAASGRHRRRC 420
R P GGRR L AA R RRRC
Sbjct: 67 RASRPDLEGGRRQLAAAVRRRRRRC 91
>12_02_0506 -
19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 425 RGHRRRCRPDAASSARLPPR 366
R RRR RP AAS A PPR
Sbjct: 55 RAQRRRTRPAAASVALAPPR 74
>10_08_0350 + 17066058-17066235,17067084-17067223
Length = 105
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSAS 449
RT RR R P PP+ + S S R ++P+S N G A+
Sbjct: 18 RTARR-RIFPQMQPPKARASRASDQRRVASPLSKSENDGDAA 58
>09_02_0074 +
3905810-3905981,3906115-3906175,3906522-3906573,
3906791-3906832,3906910-3906977,3907521-3907599,
3907685-3907721,3908048-3908164,3908247-3908332,
3908552-3908641,3909679-3909779,3909801-3909885
Length = 329
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 367 RGGRRALEAASGRHRRRCPRNGTPEARPSSHVLE 468
R G A AA GR RR C R TP + P S LE
Sbjct: 45 RAGYHADAAAQGRDRR-CSRWATPGSLPLSTALE 77
>08_02_0021 +
11307795-11308093,11308454-11308556,11309623-11309931,
11310190-11310618
Length = 379
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSC---PRSCSA 479
R ++R P P P RR+ V TP SA A S +L C PR CS+
Sbjct: 149 RGRQRRLGPPPPLPARRRLGPPPPVLVPHTPASAA--AASHPRLRCRCEPRGCSS 201
>05_06_0246 +
26656629-26656907,26657001-26657228,26657595-26657630,
26658362-26658475,26658562-26659167
Length = 420
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 456 RAWTRFRRSISRTSASMSAGRCFKRSSSSSVD 361
R WTR RS S SAS S S+SS D
Sbjct: 25 RRWTRLWRSSSSASASASTAGDASESASSEAD 56
>03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007
Length = 261
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 451 LDALPAFHFADIGVDVGRTLLQALVFLLGGQGSGAV 344
L+ H D+GV G+ L+ A+ LLGG G V
Sbjct: 201 LETAVRVHLEDVGVKHGKHLVDAVRDLLGGGDPGGV 236
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 480 SRNSFEDMRAWTRFRRSISRTSASMSAGRCFKRSSSSSVDRGPVP 346
S S R+W+R R S S S R RS S S D+G P
Sbjct: 1238 SSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGP 1282
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -1
Query: 480 SRNSFEDMRAWTRFRRSISRTS---ASMSAGRCFKRSSSSSVD 361
SR ED W RRS SRTS S S R R+SS D
Sbjct: 94 SRRRREDNNDWDSSRRSGSRTSGHDVSRSKSRSSDRTSSDRAD 136
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 323 TDSETIPNGTGPLSTEEEDERLKQRPADIDADVREMERRKR 445
TD+E+ N GP++ EE +++ R A E+E RK+
Sbjct: 551 TDTESCTNKQGPVAAEENNKKCCPRKQASMALGTEIEERKK 591
>03_01_0528 + 3966687-3967643
Length = 318
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 333 RRSRTAPDPCPPRRKTSA*SSVRP--TSTPMSAKWNAGSASKLSCPRSC 473
+ S ++P PPR T A P TS+P S N+ ++ L P SC
Sbjct: 142 KNSSSSPTKPPPRTPTRANPPPPPLPTSSPCSTVTNSVGSAALPPPMSC 190
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 368 RWTGVRCRSGSSLSPSQ----PFRQLESIDLSSKTWVSNPVARVLQESCTVQQMARR 210
R+ G+R SG + Q P ++ S+D+ S VSN +V + C + R+
Sbjct: 333 RYVGIRLASGQDILCQQLILDPSYEIPSLDMPSDAPVSNLPRKVARGICIISSSVRQ 389
>01_01_0601 - 4476261-4476728
Length = 155
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 364 HRGGRRALEAASGRHRRR 417
HRG RRA+ GRHR R
Sbjct: 44 HRGRRRAVTGDGGRHRER 61
>11_06_0215 - 21332429-21333037,21333605-21333649
Length = 217
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 308 VGMAETDSETIPNGTGPLSTEEEDERL-KQRPADIDADVREMERRK 442
+ +A+ DS+T+P+ T P + R+ K+RP D+ + + + K
Sbjct: 77 INIAKEDSDTLPSPTCPDNFSPGTSRVSKKRPRDVKSPSKRQPKPK 122
>11_01_0045 +
346817-347168,347582-347713,347790-347968,348654-348789,
348974-349070,349206-349306,349618-349781,349867-349938,
350034-350150,350235-350369,350421-350532,351197-351513,
353065-353265,353467-353544
Length = 730
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 434 VPFRGHRRRCRPDAASSARLPPRWTGVRCR 345
+ F RR CR SA PPRW RCR
Sbjct: 27 ISFPFSRRHCR-----SAAPPPRWRPTRCR 51
>10_07_0131 + 13258506-13258628,13258737-13258889
Length = 91
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -2
Query: 413 RRCRPDAASSARLPPRWTGVRCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESC 234
RR R A+S+AR+ G +L P R + + P ARVLQE+C
Sbjct: 3 RRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRV----------PSARVLQETC 52
Query: 233 T-VQQMARRSDKLDDHYTQ 180
+ ++ + R D L + +
Sbjct: 53 SYIRSLHREVDDLSERLAE 71
>08_01_0827 + 8016704-8017150
Length = 148
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 351 PDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSA 479
P P PPRR+ + T PM+ +GSA+ C RSCS+
Sbjct: 14 PSPPPPRRQEVGAAVRLTTRFPMTTA-PSGSATSALC-RSCSS 54
>06_03_1235 +
28593906-28594412,28594670-28594756,28594890-28595027,
28595752-28595771,28595772-28595967,28596104-28596168,
28596299-28596404
Length = 372
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 5 SVLNFFERTKLMK*RLYMRCLLS*CCKNYKENDKCVFLQI*CFVLSACYDR 157
S ++ + K + LY +L CC N +D+ + + F + + YDR
Sbjct: 204 SFMHIAKSVKATELNLYEDAILDACCHNIPADDELWYRAVEFFCIGSRYDR 254
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 158 GDRNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 33
G+ N H A N + + YR L FYS S + A VI L+
Sbjct: 854 GNSNDHAAGNPVMHDKKRYRYLIFFYSNSTSFVASIVVIILL 895
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SS 395
R R TAP CPP+R SA S+
Sbjct: 473 RVTARPTTAPGGCPPKRPASAPSA 496
>04_04_0490 + 25603540-25603591,25603612-25604105,25604184-25604870
Length = 410
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -1
Query: 423 RTSASMSAGRCFKRSSSSSVDRGPVPFGIVSESVSAIPTAR 301
R S S S R SS DRGPVP E VSA+ R
Sbjct: 48 RASGSASTARRLVLSSHDGEDRGPVP--AEEEIVSAMAVIR 86
>04_03_0365 -
14950398-14950880,14950967-14951262,14951277-14951413,
14951562-14952039,14952203-14952215
Length = 468
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 324 RTQRRSRTAPDPCPPRRKTSA*SS 395
R R TAP CPP+R SA S+
Sbjct: 396 RVTARPTTAPGGCPPKRPASAPSA 419
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 333 RRSRTAPDPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASK 452
R ++T P P PP +++ R + P K +G AS+
Sbjct: 90 REAKTLPPPLPPSSSSASPPPERSPAKPHGRKEGSGGASR 129
>03_02_0172 - 6131559-6131990
Length = 143
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 443 ASGVPFRGHRRRCRPDAASSARLPPRWTGVRCRSGSSLSPSQP 315
A+ VPF R R A + PPR + C+S SPS+P
Sbjct: 13 AAAVPFMRGSRHPRGRRADAVSRPPRSSSFLCQSS---SPSEP 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,674
Number of Sequences: 37544
Number of extensions: 295762
Number of successful extensions: 1559
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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