Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3959
         (446 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.44 
BC030603-1|AAH30603.2|  860|Homo sapiens armadillo repeat contai...    29   7.2  
AL445189-2|CAH71699.1|  703|Homo sapiens RP11-787I22.1 protein.        29   7.2  
AL390208-1|CAI16717.2|  867|Homo sapiens armadillo repeat contai...    29   7.2  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 383 QKKKKKNSRGGPVPNS 430
           +KKKKKNSRGGPVP +
Sbjct: 45  KKKKKKNSRGGPVPGN 60


>BC030603-1|AAH30603.2|  860|Homo sapiens armadillo repeat
           containing 2 protein.
          Length = 860

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 125 NLKFCVILCNPNVTEKKIVNQCSRIFERKKKKKNSRLVRS 6
           +LK   I+    V+ K ++N C  IF+  + +KN  L+++
Sbjct: 325 SLKLAKIILALKVSRKNLLNVCKLIFKISRNEKNDSLIQN 364


>AL445189-2|CAH71699.1|  703|Homo sapiens RP11-787I22.1 protein.
          Length = 703

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 125 NLKFCVILCNPNVTEKKIVNQCSRIFERKKKKKNSRLVRS 6
           +LK   I+    V+ K ++N C  IF+  + +KN  L+++
Sbjct: 167 SLKLAKIILALKVSRKNLLNVCKLIFKISRNEKNDSLIQN 206


>AL390208-1|CAI16717.2|  867|Homo sapiens armadillo repeat
           containing 2 protein.
          Length = 867

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 125 NLKFCVILCNPNVTEKKIVNQCSRIFERKKKKKNSRLVRS 6
           +LK   I+    V+ K ++N C  IF+  + +KN  L+++
Sbjct: 332 SLKLAKIILALKVSRKNLLNVCKLIFKISRNEKNDSLIQN 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,234,313
Number of Sequences: 237096
Number of extensions: 1206624
Number of successful extensions: 5895
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5895
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)