Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3948
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 3.7
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 3.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 3.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 3.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 3.7
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 3.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 6.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 6.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 6.6
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 587 SFFLPMLIALTGYFSFSLTCR-----*AQRARIGSVANTGPSKS-SASQNLTPDRKHD 432
SFF+P+L+ Y L R A+++RI +V +T ++ A ++++ + H+
Sbjct: 204 SFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHN 261
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 587 SFFLPMLIALTGYFSFSLTCR-----*AQRARIGSVANTGPSKS-SASQNLTPDRKHD 432
SFF+P+L+ Y L R A+++RI +V +T ++ A ++++ + H+
Sbjct: 204 SFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHN 261
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 587 SFFLPMLIALTGYFSFSLTCR*AQRAR 507
SFFLPML+ L Y ++C A R R
Sbjct: 206 SFFLPMLVML--YVYGRISCVIASRHR 230
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 356 ATALARMVTGA*GRIRYDVFRAFFTIIQSGTL 261
A A + V+ ++RY+VF+ II+ GT+
Sbjct: 458 ANADSNFVSDVVTKLRYEVFQPGDIIIKEGTI 489
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 356 ATALARMVTGA*GRIRYDVFRAFFTIIQSGTL 261
A A + V+ ++RY+VF+ II+ GT+
Sbjct: 426 ANADSNFVSDVVTKLRYEVFQPGDIIIKEGTI 457
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -1
Query: 587 SFFLPMLIALTGYFSFSLTCR-----*AQRARIGSVANTGPSKS-SASQNLTPDRKHD 432
SFF+P+L+ Y L R A+++RI +V +T ++ A ++++ + H+
Sbjct: 204 SFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRHREADDAEESVSSETNHN 261
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 411 EIQWVLSMGNLLVEPFVTS 355
EIQ+V SMG L++ ++ S
Sbjct: 213 EIQFVRSMGYYLIQIYIPS 231
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 411 EIQWVLSMGNLLVEPFVTS 355
EIQ+V SMG L++ ++ S
Sbjct: 213 EIQFVRSMGYYLIQIYIPS 231
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 387 PWTKPTEFLAG 419
PWTK EF+ G
Sbjct: 397 PWTKKLEFVVG 407
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 411 EIQWVLSMGNLLVEPFVTS 355
EIQ+V SMG L++ ++ S
Sbjct: 152 EIQFVRSMGYYLIQIYIPS 170
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 387 PWTKPTEFLAG 419
PWTK EF+ G
Sbjct: 103 PWTKKLEFVVG 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,338
Number of Sequences: 438
Number of extensions: 3603
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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