Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3942
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071210-1|AAL48832.1|  580|Drosophila melanogaster RE25570p pro...    28   8.2  
AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p pro...    28   8.2  
AE014298-1841|AAG22351.2|  580|Drosophila melanogaster CG4353-PB...    28   8.2  
AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA...    28   8.2  

>AY071210-1|AAL48832.1|  580|Drosophila melanogaster RE25570p
           protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 592 TTHYRANWVPGPPSRKSSESRQYQQSAWNRVS 497
           T  + +N+VP PPS  S+ S+   QS  ++++
Sbjct: 225 TNPFHSNYVPPPPSTHSTSSQSSTQSTCSQIA 256


>AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p
           protein.
          Length = 1178

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 592 TTHYRANWVPGPPSRKSSESRQYQQSAWNRVS 497
           T  + +N+VP PPS  S+ S+   QS  ++++
Sbjct: 823 TNPFHSNYVPPPPSTHSTSSQSSTQSTCSQIA 854


>AE014298-1841|AAG22351.2|  580|Drosophila melanogaster CG4353-PB,
           isoform B protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 592 TTHYRANWVPGPPSRKSSESRQYQQSAWNRVS 497
           T  + +N+VP PPS  S+ S+   QS  ++++
Sbjct: 225 TNPFHSNYVPPPPSTHSTSSQSSTQSTCSQIA 256


>AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA,
           isoform A protein.
          Length = 1178

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 592 TTHYRANWVPGPPSRKSSESRQYQQSAWNRVS 497
           T  + +N+VP PPS  S+ S+   QS  ++++
Sbjct: 823 TNPFHSNYVPPPPSTHSTSSQSSTQSTCSQIA 854


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,277,441
Number of Sequences: 53049
Number of extensions: 347670
Number of successful extensions: 1193
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)