Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3941
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 454 FLLVNLDLNWITPLY 498
           FL + +D+ W++P+Y
Sbjct: 61  FLEMGVDMFWLSPIY 75


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 454 FLLVNLDLNWITPLY 498
           FL + +D+ W++P+Y
Sbjct: 61  FLEMGVDMFWLSPIY 75


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 220 GLIISLFYLCFNSDAFFKCYVGKLCILIR 306
           GL+  L   C+NS+ FF+     + I+++
Sbjct: 323 GLLSDLAIGCWNSEHFFEYGGNNIEIIVK 351


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 155 TSTTDAYEPQIEKKDALVPSGR 90
           T T  AY+P+I  K  + P  R
Sbjct: 732 TDTVLAYKPKILGKPTISPDSR 753


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,333
Number of Sequences: 438
Number of extensions: 2690
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)