Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3933
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029915-1|ABM92789.1| 520|Drosophila melanogaster FI01025p pro... 31 0.91
BT003469-1|AAO39472.1| 523|Drosophila melanogaster RE70568p pro... 31 0.91
AF109306-1|AAD02889.1| 440|Drosophila melanogaster LIM homeodom... 31 0.91
AE014134-3038|AAF53756.1| 440|Drosophila melanogaster CG10699-P... 31 0.91
AE014134-3037|AAF53758.2| 520|Drosophila melanogaster CG10699-P... 31 0.91
U89162-1|AAC62307.1| 435|Drosophila melanogaster Int6 protein. 29 3.7
AY122062-1|AAM52574.1| 372|Drosophila melanogaster AT01736p pro... 29 3.7
AF132551-1|AAD27850.1| 435|Drosophila melanogaster GM01233p pro... 29 3.7
AE014296-2801|AAF49412.1| 435|Drosophila melanogaster CG9677-PA... 29 3.7
>BT029915-1|ABM92789.1| 520|Drosophila melanogaster FI01025p
protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 442 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 293
+Q+ +YH CF+C +CS T F L RKL ICK E+ KA+G +Y D
Sbjct: 197 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 247
>BT003469-1|AAO39472.1| 523|Drosophila melanogaster RE70568p
protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 442 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 293
+Q+ +YH CF+C +CS T F L RKL ICK E+ KA+G +Y D
Sbjct: 200 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 250
>AF109306-1|AAD02889.1| 440|Drosophila melanogaster LIM homeodomain
transcriptionfactor protein.
Length = 440
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 442 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 293
+Q+ +YH CF+C +CS T F L RKL ICK E+ KA+G +Y D
Sbjct: 117 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 167
>AE014134-3038|AAF53756.1| 440|Drosophila melanogaster CG10699-PA,
isoform A protein.
Length = 440
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 442 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 293
+Q+ +YH CF+C +CS T F L RKL ICK E+ KA+G +Y D
Sbjct: 117 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 167
>AE014134-3037|AAF53758.2| 520|Drosophila melanogaster CG10699-PB,
isoform B protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 442 SQNIIYHKALCFICLLCSLVSTTA--FALNITRKLHKICK---EKTKAEGRIYFD 293
+Q+ +YH CF+C +CS T F L RKL ICK E+ KA+G +Y D
Sbjct: 197 AQDNVYHLQ-CFLCAMCSRTLNTGDEFYLMEDRKL--ICKRDYEEAKAKG-LYLD 247
>U89162-1|AAC62307.1| 435|Drosophila melanogaster Int6 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 316 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 495
L F L F E+Y++Q+L + TVNK N + Y + +TR K+ N +MP+ L
Sbjct: 18 LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71
Query: 496 L 498
+
Sbjct: 72 V 72
>AY122062-1|AAM52574.1| 372|Drosophila melanogaster AT01736p
protein.
Length = 372
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 316 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 495
L F L F E+Y++Q+L + TVNK N + Y + +TR K+ N +MP+ L
Sbjct: 18 LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71
Query: 496 L 498
+
Sbjct: 72 V 72
>AF132551-1|AAD27850.1| 435|Drosophila melanogaster GM01233p
protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 316 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 495
L F L F E+Y++Q+L + TVNK N + Y + +TR K+ N +MP+ L
Sbjct: 18 LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71
Query: 496 L 498
+
Sbjct: 72 V 72
>AE014296-2801|AAF49412.1| 435|Drosophila melanogaster CG9677-PA
protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 316 LWFSLYRFCVTFELYSKQKL*WKQVNTVNK*NTVPYDI*CFETRAKHKKQNHGDKMPKNL 495
L F L F E+Y++Q+L + TVNK N + Y + +TR K+ N +MP+ L
Sbjct: 18 LTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTM---DTR---KRLNLSQEMPEEL 71
Query: 496 L 498
+
Sbjct: 72 V 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,048,031
Number of Sequences: 53049
Number of extensions: 432102
Number of successful extensions: 948
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -