Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3930
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 109 YPQPY*GSENIYAMMSYPCFSVEC 180
           YP PY GS+  + + SY   +++C
Sbjct: 61  YPLPYSGSKCTWTITSYHRINLKC 84


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 410 YTETWIRPTWHKYF*NLSKVGGRTWIKFANFEH 312
           +T+ W+RP W     NL+K  G+  IK     H
Sbjct: 224 HTKIWLRPDW---LFNLTKY-GKNQIKLLEIIH 252


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 10   LYINKTLLHSYVFY 51
            L+ N TLLHS++++
Sbjct: 1730 LHPNNTLLHSFMYH 1743



 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 480  LYYNKTLLHSYVFY 521
            L+ N TLLHS++++
Sbjct: 1730 LHPNNTLLHSFMYH 1743


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 10   LYINKTLLHSYVFY 51
            L+ N TLLHS++++
Sbjct: 1726 LHPNNTLLHSFMYH 1739



 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 480  LYYNKTLLHSYVFY 521
            L+ N TLLHS++++
Sbjct: 1726 LHPNNTLLHSFMYH 1739


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,064
Number of Sequences: 438
Number of extensions: 3975
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)