Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3923
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical...    29   2.1  
Z82054-3|CAB04841.2|  269|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +2

Query: 446 TPLRPKPA*PNPARICSLWSPESREALNN-----VTLLVRVSHSKRET 574
           T L   PA PN AR  S W  E+  + NN     V LL ++S S++E+
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKES 166


>Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +2

Query: 446 TPLRPKPA*PNPARICSLWSPESREALNN-----VTLLVRVSHSKRET 574
           T L   PA PN AR  S W  E+  + NN     V LL ++S S++E+
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKES 166


>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 478 SGKDMLTVEPRESGGSKQCDFTSPRFAFKTRDATSNPFWIAEIDA 612
           SG DM T+E  + GGS     TSP +      + S P  +A + A
Sbjct: 32  SGGDMKTLETLDDGGSTSSHQTSPEYPSPPPPSNSPPESMASLQA 76


>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 478 SGKDMLTVEPRESGGSKQCDFTSPRFAFKTRDATSNPFWIAEIDA 612
           SG DM T+E  + GGS     TSP +      + S P  +A + A
Sbjct: 32  SGGDMKTLETLDDGGSTSSHQTSPEYPSPPPPSNSPPESMASLQA 76


>AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +2

Query: 446 TPLRPKPA*PNPARICSLWSPESREALNN-----VTLLVRVSHSKRET 574
           T L   PA PN AR  S W  E+  + NN     V LL ++S S++E+
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKES 166


>Z82054-3|CAB04841.2|  269|Caenorhabditis elegans Hypothetical
           protein T26F2.2 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = +1

Query: 424 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSPRFAFKTRDATSNPFWIAE 603
           P+ G+  N  K   +L E G+      P E   + +C     R  FK  D     F+ AE
Sbjct: 84  PNKGMGYNFEKY-MTLNEDGE---LRNPNEKVSNAECSKVVLRTTFKNDDEKLKVFYAAE 139

Query: 604 IDAI 615
           +DAI
Sbjct: 140 VDAI 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,189
Number of Sequences: 27780
Number of extensions: 300521
Number of successful extensions: 818
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)