Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3922
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 599 FFVNI-MYRLNYVIFSFKVSFNS 664
           F + I  YRLN+  F+F ++ N+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINA 508


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 599 FFVNI-MYRLNYVIFSFKVSFNS 664
           F + I  YRLN+  F+F ++ N+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINA 508


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 126 TLIDAKQTVVLPNFM 82
           TL DA Q  +LPNF+
Sbjct: 392 TLEDAPQNSLLPNFV 406


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/17 (41%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
 Frame = -2

Query: 306 HAHYHRTQT--HIHLKK 262
           H H+H+TQ+  H+H ++
Sbjct: 352 HHHHHQTQSLQHLHYRQ 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,950
Number of Sequences: 438
Number of extensions: 3873
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)