Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3908
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0364 + 33392181-33392487,33392919-33392994,33393671-333937...    28   9.5  

>03_06_0364 +
           33392181-33392487,33392919-33392994,33393671-33393740,
           33394291-33394320,33394724-33394867,33394954-33395058,
           33395496-33395642,33396994-33397069,33397726-33397814,
           33398178-33398269,33398351-33398390,33398475-33398531
          Length = 410

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -2

Query: 284 IESADDNRDCNSAQESRKHYNSKKKTCKKS 195
           IES  DN D N A  +RK  ++ K+TCK S
Sbjct: 345 IESKIDNNDPN-ASLTRKRVDAIKRTCKSS 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,038
Number of Sequences: 37544
Number of extensions: 292114
Number of successful extensions: 501
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)