Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3904
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 80 3e-28
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 87 1e-17
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 84 1e-16
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 84 1e-16
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 84 1e-16
04_01_0042 + 473912-474058,474208-474349,474442-476264 84 1e-16
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 83 2e-16
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 82 5e-16
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 63 3e-10
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 38 0.012
07_03_0263 - 15951011-15951818,15952009-15952526,15952949-159531... 28 7.1
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 7.1
01_06_0824 - 32243495-32244319,32244449-32244859 28 9.4
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 80.2 bits (189), Expect(2) = 3e-28
Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Frame = +2
Query: 17 IEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSS-DGSGTYEI 193
++E K GA+ + +IGQFGVGFYSAF+VA+K+ V T+S K D Y W S +Y I
Sbjct: 446 LKENKDLGAD--NGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQ-YVWEGVADSSSYVI 502
Query: 194 QEADGVE----IGTKIVVYLKTDCR-EFADDDTVKSIIKKYSNFVSSPIFLNNDQVNSIK 358
+E E GT+I + L+ D + EFAD ++ ++K YS FVS PI+ ++ +++
Sbjct: 503 KEETDPEKMLTRGTQITLVLRPDDKFEFADPGRIQGLVKNYSQFVSFPIYTWQEKSRTVE 562
Score = 63.3 bits (147), Expect(2) = 3e-28
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +2
Query: 347 NSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP-G 523
N KP+W+ PKEI + ++ EFYK N + P H+ T+ + RS+LY+P P
Sbjct: 597 NETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 656
Query: 524 LFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
E+ + LY +++ I + L ++KGVVDS
Sbjct: 657 NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDS 699
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 87.0 bits (206), Expect = 1e-17
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = +2
Query: 14 FIEEIKK-QGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDG-SGTY 187
F++ +K+ Q A S++IGQFGVGFYSAF+V+DK+ V T+S K D Y W + S +Y
Sbjct: 453 FLKALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQ-YVWEGEAESSSY 511
Query: 188 EIQEADGVE----IGTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIF 328
I+E E GT++ +YLK + + FA + ++ ++K YS FVS PI+
Sbjct: 512 TIREETDPEKLLPRGTRLTLYLKREDKGFAHPEKIQKLVKNYSQFVSFPIY 562
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/128 (30%), Positives = 67/128 (52%)
Frame = +2
Query: 269 DDTVKSIIKKYSNFVSSPIFLNNDQVNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPR 448
DD K+ +KK + V + + + N +P+WL P+E++ E++ EFYK N Y P
Sbjct: 585 DDETKTEVKKKTKTVVEK-YWDWELTNETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPL 643
Query: 449 FTLHYKTDAPLSIRSILYVPEGKPGLFELSRDSDVGVALYSRKILIKSKAENILP*MVAI 628
+ H+ T+ + RSILYVP K +++ + LY +++ I + L
Sbjct: 644 ASSHFTTEGEVEFRSILYVPATKKE--DITDRKTKNIRLYVKRVFISDDFDGELFPRYLS 701
Query: 629 WLKGVVDS 652
+++GVVDS
Sbjct: 702 FVRGVVDS 709
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 84.2 bits (199), Expect = 1e-16
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 SKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGT 184
+K F+E + GA+ S+IGQFGVGFYSA++VA+++ V T+ + D Y W S G+
Sbjct: 103 TKEFMEALAA-GADV--SMIGQFGVGFYSAYLVAERVVVTTKHN--DDEQYVWESQAGGS 157
Query: 185 YEI-QEADGVEI--GTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFL 331
+ + ++ G ++ GTKI +YLK D E+ ++ +K +IKK+S F+S PI L
Sbjct: 158 FTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISL 209
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/104 (32%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +2
Query: 344 VNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP- 520
VN KP+W+ +P+EIT+E++ FYK ++N +++ H+ + L +++L+VP+ P
Sbjct: 263 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPF 322
Query: 521 GLFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
LF+ +R + LY R++ I E ++P ++ ++KG+VDS
Sbjct: 323 DLFD-TRKKLNNIKLYVRRVFIMDNCEELIPEWLS-FVKGIVDS 364
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 612 PKWLRFG*RGL*TPEDIPLNLSRELV 689
P+WL F +G+ ED+PLN+SRE++
Sbjct: 352 PEWLSFV-KGIVDSEDLPLNISREML 376
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 SKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGT 184
+K F+E + GA+ S+IGQFGVGFYSA++VA+++ V T+ + D Y W S G+
Sbjct: 103 TKEFMEALAA-GADV--SMIGQFGVGFYSAYLVAERVVVTTKHN--DDEQYVWESQAGGS 157
Query: 185 YEI-QEADGVEI--GTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFL 331
+ + ++ G ++ GTKI +YLK D E+ ++ +K ++KK+S F+S PI L
Sbjct: 158 FTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISL 209
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/104 (33%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +2
Query: 344 VNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP- 520
+N KP+WL +P+EIT+E++ FYK ++N +++ H+ + L ++IL+VP+ P
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 521 GLFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
LF+ +R + LY R++ I E ++P ++ ++KG+VDS
Sbjct: 323 DLFD-TRKKQNNIKLYVRRVFIMDNCEELIPEWLS-FVKGIVDS 364
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 612 PKWLRFG*RGL*TPEDIPLNLSRELV 689
P+WL F +G+ ED+PLN+SRE++
Sbjct: 352 PEWLSFV-KGIVDSEDLPLNISREML 376
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 SKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGT 184
+K F+E + GA+ S+IGQFGVGFYSA++VA+++ V T+ + D Y W S G+
Sbjct: 103 TKEFMEALAA-GADV--SMIGQFGVGFYSAYLVAERVVVTTKHN--DDEQYVWESQAGGS 157
Query: 185 YEI-QEADGVEI--GTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFL 331
+ + ++ G ++ GTKI +YLK D E+ ++ +K ++KK+S F+S PI L
Sbjct: 158 FTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISL 209
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/104 (33%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +2
Query: 344 VNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP- 520
+N KP+WL +P+EIT+E++ FYK ++N +++ H+ + L ++IL+VP+ P
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 521 GLFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
LF+ +R + LY R++ I E ++P ++ ++KG+VDS
Sbjct: 323 DLFD-TRKKQNNIKLYVRRVFIMDNCEELIPEWLS-FVKGIVDS 364
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 612 PKWLRFG*RGL*TPEDIPLNLSRELV 689
P+WL F +G+ ED+PLN+SRE++
Sbjct: 352 PEWLSFV-KGIVDSEDLPLNISREML 376
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 SKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGT 184
+K F+E ++ GA+ S+IGQFGVGFYSA++VA+K+ V T+ + D Y W S G+
Sbjct: 110 TKEFMEALQA-GADV--SMIGQFGVGFYSAYLVAEKVVVTTKHN--DDEQYVWESQAGGS 164
Query: 185 YEIQ-EADGVEI--GTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFL 331
+ + + G + GTKI ++LK D E+ ++ +K ++KK+S F+S PI+L
Sbjct: 165 FTVTLDTAGERLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYL 216
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 341 QVNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP 520
Q+N KP+WL +P+EI++E++ FYK ++N ++ H+ + L ++IL+VP P
Sbjct: 267 QINKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAP 326
Query: 521 -GLFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
LF+ +R + LY R++ I E ++P + ++KGVVDS
Sbjct: 327 FDLFD-TRKKMNNIKLYVRRVFIMDNCEELIPEWLG-FVKGVVDS 369
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 612 PKWLRFG*RGL*TPEDIPLNLSRELV 689
P+WL F +G+ +D+PLN+SRE++
Sbjct: 357 PEWLGFV-KGVVDSDDLPLNISREML 381
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 83.4 bits (197), Expect = 2e-16
Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Frame = +2
Query: 17 IEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSS-DGSGTYEI 193
++E K GA+ + +IGQFGVGFYSAF+VA+K+ V T+S K D Y W + S +Y I
Sbjct: 196 LKENKDLGAD--NGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQ-YVWEAMADSSSYVI 252
Query: 194 QEADGVE----IGTKIVVYLKTDCR-EFADDDTVKSIIKKYSNFVSSPIFLNNDQVNSIK 358
+E E GT+I ++L+ D + EFAD ++ ++K YS FVS PI+ ++ +++
Sbjct: 253 KEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQFVSFPIYTWQEKSRTVE 312
Query: 359 PLWLFEPKE 385
+ EPKE
Sbjct: 313 -VEEEEPKE 320
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +2
Query: 347 NSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP-G 523
N KP+W+ PKE+ + ++ EFYK N + P H+ T+ + RS+LY+P P
Sbjct: 347 NETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 406
Query: 524 LFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
E+ + LY +++ I + L ++KGVVDS
Sbjct: 407 NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDS 449
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/112 (35%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 SKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGT 184
+ +F+E+++ G ++IGQFGVGFYS ++VAD +EV ++ + D + W S G+
Sbjct: 204 TSAFVEKMQTGGD---LNLIGQFGVGFYSVYLVADYVEVISKHN--DDKQHVWESKADGS 258
Query: 185 YEIQEADGVEI---GTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFL 331
+ I E E GT+I ++L+ + +E+ ++D +K ++KKYS F++ PI+L
Sbjct: 259 FAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYL 310
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Frame = +2
Query: 266 DDDTVKSIIKKYSNFVSSPIFLNNDQVNSIKPLWLFEPKEITQEQHIEFYKFISNSY--D 439
+++T +S KK + +N +K +WL PKE+T+E++ +FY ++ + D
Sbjct: 343 EEETEESEEKKPKTKTVKETTTEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDD 402
Query: 440 KPRFTLHYKTDAPLSIRSILYVPEGKP-GLFELSRDSD-VGVALYSRKILIKSKAENILP 613
KP H+ + + +++L+VP P L+E +S+ + LY R++ I + + +LP
Sbjct: 403 KPLSWSHFTAEGDVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLP 462
Query: 614 *MVAIWLKGVVDS 652
++ +LKG+VDS
Sbjct: 463 KYLS-FLKGLVDS 474
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +2
Query: 374 EPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKP-GLFELSRDSD 550
+P+EIT+E++ FYK ++N +++ H+ + L ++IL+VP+ P LF+ +R
Sbjct: 19 KPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFD-TRKKQ 77
Query: 551 VGVALYSRKILIKSKAENILP*MVAIWLKGVVDS 652
+ LY R++ I E ++P ++ ++KG+VDS
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLS-FVKGIVDS 110
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 612 PKWLRFG*RGL*TPEDIPLNLSRELV 689
P+WL F +G+ ED+PLN+SRE++
Sbjct: 98 PEWLSFV-KGIVDSEDLPLNISREML 122
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 464 KTDAPLSIRSILYVPEGKP-GLFELSRDSDVGVALYSRKILIKSKAENILP*MVAIWLKG 640
K++ L ++IL+VP+G P +F+ +R + LY R++ I E ++P ++ +++G
Sbjct: 551 KSEGQLEFKAILFVPKGAPFDIFD-TRKKLNNIKLYVRRVFIMDNCEELIPEWLS-FVEG 608
Query: 641 VVD 649
VVD
Sbjct: 609 VVD 611
>07_03_0263 -
15951011-15951818,15952009-15952526,15952949-15953197,
15953270-15953857
Length = 720
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 47 QASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDS-PGYQWSSDGSG 181
QA + G G+G Y AF+ D E+ T +G S P Y+ G G
Sbjct: 36 QAPAAEGFPGLGMYGAFLQGDDDELLTGRGRGSSLPPYRPPRAGVG 81
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 47 QASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDS-PGYQWSSDGSG 181
QA G G+G Y AF+ D E+ T +G S P Y+ G+G
Sbjct: 36 QAPVAEGFPGLGMYGAFLQGDDDELLTGHGRGSSLPPYRPPRAGAG 81
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 443 PRFTLHYKTDAPLSIRSI-LYVPEGKPG 523
PRFTL YKT+A ++R + L +P PG
Sbjct: 293 PRFTLSYKTNAAETLRQLGLRLPFEYPG 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,518,765
Number of Sequences: 37544
Number of extensions: 405938
Number of successful extensions: 897
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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