Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3898
(561 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 268 3e-73
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 85 5e-18
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 84 1e-17
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 79 3e-16
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 69 4e-13
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 62 5e-11
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 58 9e-10
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 49 4e-07
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 29 0.62
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 28 0.82
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.4
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 1.4
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 27 2.5
SPBC25H2.07 |tif11||translation initiation factor eIF1A|Schizosa... 27 2.5
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 4.4
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 26 4.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 4.4
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 25 5.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.8
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.8
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 25 7.6
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 7.6
SPCC1235.02 |bio2|SPCC320.01c|biotin synthase|Schizosaccharomyce... 25 7.6
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 7.6
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 268 bits (658), Expect = 3e-73
Identities = 123/177 (69%), Positives = 151/177 (85%)
Frame = +3
Query: 21 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 200
PK +ENANILIANT MDTDK+KVFG+ ++VD+ K+AELE AE+EKMK KV KI +H N
Sbjct: 225 PKVMENANILIANTAMDTDKVKVFGARVRVDTTGKLAELERAEREKMKAKVEKIKSHNIN 284
Query: 201 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 380
FINRQLIYN+PEQLFADAG+M+IEHADF+GIERL LVTGGEI STFD P+ VKLGHCK
Sbjct: 285 CFINRQLIYNWPEQLFADAGIMSIEHADFDGIERLSLVTGGEIASTFDHPELVKLGHCKK 344
Query: 381 IEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 551
IEE++IG++ +I+FSGV G ACTIV+RGAT Q++DE+ER++HDAL VL+ TV E +
Sbjct: 345 IEEIIIGEDKMIKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAESR 401
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 85.4 bits (202), Expect = 5e-18
Identities = 51/179 (28%), Positives = 84/179 (46%)
Frame = +3
Query: 6 GTRHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKIL 185
G QPK +N IL + ++ K + + ++VD + + + AE + K+ I+
Sbjct: 229 GFEQQPKFFKNPKILCLDVELEL-KAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIV 287
Query: 186 AHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 365
A V +++ I + Q FAD + + + R+ GG I ST + ++ L
Sbjct: 288 ATGAKVVLSKLPIGDLATQYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHL 347
Query: 366 GHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 542
G C EE IG + F G CT+++RG Q I E ERSLHDA+ ++ +K
Sbjct: 348 GTCDTFEERQIGGDRFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALK 406
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 84.2 bits (199), Expect = 1e-17
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Frame = +3
Query: 21 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 200
P ++ENA I I P + K K + + S+++ L+ EKEK ++ + + N
Sbjct: 242 PHRIENAKIAILTCPFEPPKPKT-KHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGAN 300
Query: 201 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 380
+ I + + L + A+ IE + + T G IV F+ KLG +
Sbjct: 301 LVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGI 360
Query: 381 IEEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 545
+ EV G + ++ A A T+ +RG+ + ++DEA+R+LHDALCV+ +++
Sbjct: 361 VREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRD 417
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 79.4 bits (187), Expect = 3e-16
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Frame = +3
Query: 21 PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 200
P ++E ANI + + K + + V+ ++ ++ E++ + + KI N
Sbjct: 227 PTRIEKANIALIQFQLSPPKPDMENQVV-VNDYRQMDKILKEERQYLLNMCKKIKKAGAN 285
Query: 201 VF-----INRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 365
V I R + + A +M I+ + + +E + TG + ++ +S + KL
Sbjct: 286 VILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKL 345
Query: 366 GHCKLIEEVLIGDESLIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 542
GH L+EE E +++FSGV G +I+ RGA ++EAERSLHDALCV+ VK
Sbjct: 346 GHADLVEETSSSGEKIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVK 405
Query: 543 E 545
+
Sbjct: 406 Q 406
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 69.3 bits (162), Expect = 4e-13
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Frame = +3
Query: 27 KVENANILIANTPMDTDKIKV-FGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 203
+V+NA I + + MD K K+ G + +D ++ ++ E ++V KIL NV
Sbjct: 233 RVQNAKIAVLD--MDLQKTKMALGVHVTIDDPDQLEKIREREVMITLERVKKILNAGANV 290
Query: 204 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVK------L 365
+ + I + + +AG MA+ E + R+ +G ++S+ + + + L
Sbjct: 291 ILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRIAKASGATLLSSLSNLEGEETFESSYL 350
Query: 366 GHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 545
G + + + D+ I G S+ +IV+RG + +DE ERS+HD+L V+ T++
Sbjct: 351 GSAEEVVQEKFSDDECILVKGTKAYSSASIVLRGPNEYSLDEMERSMHDSLSVVKRTLES 410
Query: 546 PK 551
K
Sbjct: 411 GK 412
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 62.1 bits (144), Expect = 5e-11
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 24 KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 203
+++EN I++ + P++ K + + I++ + E+E++K + I+A K ++
Sbjct: 229 RRIENPRIVLLDCPLEYRKGES-QTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDL 287
Query: 204 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGH-CKL 380
I + + + + A + A+ R+ G IV+ + + +G C L
Sbjct: 288 VITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGL 347
Query: 381 IEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 551
+GDE +G ACTI++RG ++ +I+E ER+L DA+ V PK
Sbjct: 348 FYIDKLGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPK 404
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 58.0 bits (134), Expect = 9e-10
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Frame = +3
Query: 6 GTRH--QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNK 179
G RH PK+V+NA ILI N ++ +K ++ S + + L +E++ + +K+ K
Sbjct: 213 GARHPDMPKQVKNAYILILNVSLEYEKSEI-NSGFFYSTSEQRERLVESERKFVDNKLRK 271
Query: 180 ILAHK---CN-------VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEI 329
I+ K C V IN++ I + A G+MA+ A +ERL L GG
Sbjct: 272 IVELKKEVCERDPTANFVIINQKGIDPLSLDVLAKNGIMALRRAKRRNMERLQLACGGVA 331
Query: 330 VSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLH 509
++ D + LG + E +G+E V + TI+I G I + + +
Sbjct: 332 QNSVDDLNPEVLGWAGSVYERTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQQIQDATR 391
Query: 510 DALCVLAATVKE 545
D L + V++
Sbjct: 392 DGLRAVKNAVED 403
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 545 FFYSSSKHAKRIME*TLSFVDNLL 474
FFYS+S+ +R++E FVDN L
Sbjct: 246 FFYSTSEQRERLVESERKFVDNKL 269
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 49.2 bits (112), Expect = 4e-07
Identities = 34/172 (19%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Frame = +3
Query: 33 ENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFIN 212
+ A + + + P+D + + G T+ + + ++ + E+ ++ + +I V +
Sbjct: 235 KEAKVAVFSCPLDISQTETKG-TVLLHNAQEMLDFSKGEENLIESHIKEIYDAGVRVVVT 293
Query: 213 RQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEV 392
+ + ++ I + RL V G ++ P ++G ++E +
Sbjct: 294 SGNVNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLARMGVPMPEEMGSVDVVETI 353
Query: 393 LIGDESLIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 545
IG + + F V + TIV+RGAT+ +D+ ER++ D + ++ A VK+
Sbjct: 354 EIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIVKALVKD 405
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 28.7 bits (61), Expect = 0.62
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 15 HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK 194
H+ K E T K+KV+G + ++I+ L + KEK KD ++ HK
Sbjct: 617 HKEAKSEIEKDSSKPTEDQESKLKVYGRV----AYSRISNLHKSSKEKGKDSQVRVALHK 672
Query: 195 CNVFIN 212
N +N
Sbjct: 673 ENTALN 678
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.3 bits (60), Expect = 0.82
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -3
Query: 466 PRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDT---ISPPVTKPSLS 296
P+IT + E ++ R+ S+ + SS S T S ES D S PVT +S
Sbjct: 540 PKITTIDGESPSSISSRLPSSNLEQGSS-----SSVTKSPESMPDPSAKASSPVTSKGVS 594
Query: 295 IPSKSACSIAITPAS 251
I KSA + TP S
Sbjct: 595 INEKSAVNNYATPLS 609
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 1.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -3
Query: 469 APRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTL-SGESNVDTIS--PPVTKPSL 299
AP + I + P S+P + + + PS SG V S PPV KPS+
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 298 SIPSKSACSIAITPASA 248
+ P S+A+ P A
Sbjct: 1100 AAPPVPKPSVAVPPVPA 1116
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -3
Query: 427 PEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 278
P + + +S+P+ +I+ ++ +S + + PP + S+ IP K+A
Sbjct: 100 PAEALTISTPVDPINIDELDRAYAVSPSDTSNLLHPPTSSSSIPIPIKNA 149
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 26.6 bits (56), Expect = 2.5
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 412 KLSSPIRTSSINLQ*PSFTLSGESNV-DTISPPVTKPSLSIPSKSACS 272
K S + +S ++ TLS S V T S PVT S S+ KSA S
Sbjct: 194 KASKKLTSSPTSVASKKATLSSVSKVASTSSLPVTSVSASVDPKSAAS 241
>SPBC25H2.07 |tif11||translation initiation factor
eIF1A|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 26.6 bits (56), Expect = 2.5
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 150 KEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMA----IEHADFEGIERLGLVT 317
K K K N+ N R+L Y Q++A M IE A F+G++RLG +
Sbjct: 3 KNKGKGGKNRRRGKNENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIR 62
Query: 318 G 320
G
Sbjct: 63 G 63
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 21 PKKVENANILIANTPMDTDKIKVFGST 101
P K E N++ AN + DK + FGS+
Sbjct: 118 PNKKEETNVVHANEDISLDKRQSFGSS 144
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 78 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKIL-AHK 194
K+K G T++ D A VA K+ K K K+L AHK
Sbjct: 237 KLKELGITLESDVSHPKAASPVASKKSSKKKNKKVLAAHK 276
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 4.4
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Frame = -3
Query: 457 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSA 278
T+V + T + S+PI +SS+ T S N T T + S P S+
Sbjct: 3376 TVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSS 3435
Query: 277 ----CSIAITPASANNCSG*LYISCLLMKTLHLCAKXXXXXXXXXXXXXXSNSAILAIES 110
S IT +S N S + S +L + + + S+++ S
Sbjct: 3436 TVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSSTVITSSVVIGSS 3495
Query: 109 TLIVEPNTLILSVSI 65
+++ ++++ SVS+
Sbjct: 3496 SVLSYASSIVSSVSL 3510
Score = 25.4 bits (53), Expect = 5.8
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Frame = -3
Query: 457 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDT--ISPPVTKPSLSIPSK 284
T+V + T + S+PI +SS+ + T S N T S V S +I S
Sbjct: 3292 TVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS 3351
Query: 283 SA--CSIAITPASANNCSG*LYISCLLMKTLHLCAKXXXXXXXXXXXXXXSNSAILAIES 110
S S +T +S N S + S ++ + + + NS+ I S
Sbjct: 3352 SILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS-TPITS 3410
Query: 109 TLIVEPNTLILS 74
+ +V +T I S
Sbjct: 3411 STVVNSSTPITS 3422
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 393 LIGDESLIRFSGVALGSACTIV 458
LIGDESLI++S A C V
Sbjct: 261 LIGDESLIKYSAAAHTRICFAV 282
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 5.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 448 QAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSL---SIPSKSA 278
Q ++T ++P TSS L S S S + S +T SL SIPS S+
Sbjct: 186 QPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSS 245
Query: 277 CSIAITPASANNCS 236
S + + + +++ S
Sbjct: 246 SSSSTSSSLSSSSS 259
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 424 EKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSACSI 269
+K IK + TSS N Q S+T G N + T PS+ IP+ A ++
Sbjct: 604 DKTIKTNQATSTSSSNTQEISYT--GTLNDNINEGLSTFPSIDIPASEADNV 653
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 25.0 bits (52), Expect = 7.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -3
Query: 400 PIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLS---IPSKSACSIAITPASANNCSG 233
P RTSS + + S T S P +T PS S IP + S A++P+ + SG
Sbjct: 285 PSRTSSFSSKHRSVTFSPPDLAILFDPSITSPSSSVGQIPQPTDHS-ALSPSKPMSISG 342
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 282 DFEGIERLGLVTGGEIVSTFDSPDKV 359
DF +ER L E +S+FD+ +K+
Sbjct: 30 DFNALERYNLKENFEALSSFDNGEKI 55
>SPCC1235.02 |bio2|SPCC320.01c|biotin synthase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 363
Score = 25.0 bits (52), Expect = 7.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 15 HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAEL----EVAEKEKM 161
H PKKV+ +L T T+ K + + ++ K +L EV EK K+
Sbjct: 51 HDPKKVQQCTLLSIKTGGCTEDCKYCAQSSRYNTGVKATKLMKIDEVLEKAKI 103
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 7.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 54 ANTPMDTDKIKVFGSTIKVDSMAKIAEL-EVAEKEKMKDKVNKILAHK 194
A+ DT +I DS A + E +V E+++ KD+ NK HK
Sbjct: 390 ASDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKASLHK 437
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,019
Number of Sequences: 5004
Number of extensions: 43882
Number of successful extensions: 183
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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