Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3897
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 210 3e-55
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 208 1e-54
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 207 2e-54
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 207 2e-54
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 207 2e-54
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 207 2e-54
03_01_0034 + 318432-318825,318902-319851 207 2e-54
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 205 9e-54
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 84 3e-17
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 81 3e-16
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 81 3e-16
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 76 9e-15
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 49 9e-07
02_01_0523 - 3792864-3792962,3793509-3793610,3793861-3793974,379... 29 0.81
10_08_0068 + 14624376-14624975,14625113-14625601 29 1.4
06_02_0048 - 10943553-10944050 29 1.4
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 29 1.4
02_05_0933 + 32846658-32846729,32847038-32847133,32847243-328474... 28 1.9
01_05_0555 - 23231327-23231547,23232103-23232232,23233260-23233724 27 3.3
11_06_0415 + 23306555-23306794,23306842-23307684 27 4.3
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977 27 4.3
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 27 5.7
10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331 27 5.7
06_01_0769 - 5745324-5746970 27 5.7
10_08_0839 + 20940847-20941329 26 7.6
08_02_1268 - 25751744-25752637 26 7.6
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 26 7.6
07_03_0457 - 18404577-18405193,18405317-18405563,18405734-184059... 26 7.6
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 210 bits (512), Expect = 3e-55
Identities = 95/118 (80%), Positives = 105/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQMLN+QNKN SYFVEWIPNNVK+ VCDI PRGLK A TF+GN T IQE+ +R
Sbjct: 323 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRR 380
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 208 bits (508), Expect = 1e-54
Identities = 95/118 (80%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQMLN+QNKN SYFVEWIPNNVK+ VCDI P GLK A TFIGN T IQE+ +R
Sbjct: 323 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRR 380
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 207 bits (506), Expect = 2e-54
Identities = 94/118 (79%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 284 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 343
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQM+N+QNKN SYFVEWIPNNVK+ VCDI PRGL A TFIGN T IQE+ +R
Sbjct: 344 TKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRR 401
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 207 bits (506), Expect = 2e-54
Identities = 94/118 (79%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQM+N+QNKN SYFVEWIPNNVK+ VCDI PRGL A TFIGN T IQE+ +R
Sbjct: 323 TKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRR 380
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 207 bits (505), Expect = 2e-54
Identities = 95/118 (80%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQMLN+QNKN SYFVEWIPNNVK+ VCDI P GLK A TFIGN T IQE+ +R
Sbjct: 323 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRR 380
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 207 bits (505), Expect = 2e-54
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 443 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 502
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQM+N+QNKN SYFVEWIPNNVK+ VCDI PRGL A TF+GN T IQE+ +R
Sbjct: 503 TKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRR 560
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 207 bits (505), Expect = 2e-54
Identities = 95/118 (80%), Positives = 104/118 (88%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS
Sbjct: 263 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQMLN+QNKN SYFVEWIPNNVK+ VCDI P GLK A TFIGN T IQE+ +R
Sbjct: 323 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRR 380
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 205 bits (500), Expect = 9e-54
Identities = 93/118 (78%), Positives = 103/118 (87%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS
Sbjct: 279 LHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMS 338
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
KEVDEQM+N+QNKN SYFVEWIPNNVK+ VCDI P GL A TF+GN T IQE+ +R
Sbjct: 339 TKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRR 396
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 84.2 bits (199), Expect = 3e-17
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 265 IHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV----CDISPRG----LKKAGTFIGNFTGI 336
K+V+ + I+ K FV+W P K G+ + P G +++A I N T +
Sbjct: 325 PKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAV 384
Query: 337 QELVKR 354
E+ R
Sbjct: 385 AEVFSR 390
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 265 IHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV----CDISPRG----LKKAGTFIGNFTGI 336
K+V+ + I+ K FV+W P K G+ + P G +++A I N T +
Sbjct: 325 PKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSV 384
Query: 337 QELVKR 354
E+ R
Sbjct: 385 VEVFSR 390
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 80.6 bits (190), Expect = 3e-16
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 265 IHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV----CDISPRG----LKKAGTFIGNFTGI 336
K+V+ + I+ K FV+W P K G+ + P G +++A I N T +
Sbjct: 325 PKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSV 384
Query: 337 QELVKR 354
E+ R
Sbjct: 385 VEVFSR 390
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 75.8 bits (178), Expect = 9e-15
Identities = 30/91 (32%), Positives = 54/91 (59%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + +VPE+T +F+ ++MA CDPRHG+Y+ ++RG +
Sbjct: 346 IHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVV 405
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + +I+ + FV+W P K G+
Sbjct: 406 PKDVNAAVHSIKTRRTVQFVDWCPTGFKCGI 436
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 49.2 bits (112), Expect = 9e-07
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 HFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAIF 165
HF M G+ PLT R R TV ++ +++ KN+M + R+ +Y+++ I
Sbjct: 267 HFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNII 326
Query: 166 RGRMSMKEVDEQMLNIQNKNFSYFVEWIPNNVK 264
+G + +V E + I+ + F+EW P +++
Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQ 359
>02_01_0523 -
3792864-3792962,3793509-3793610,3793861-3793974,
3794060-3794158,3794725-3794779,3795266-3795433,
3795668-3795735,3796133-3796195,3796425-3796703
Length = 348
Score = 29.5 bits (63), Expect = 0.81
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 145 LTVAAIFRGRMSMKEVDEQMLNIQNKNFSYFVEWIPN-NVKTGVCDISPRGLKKAGT 312
+++ +FRG+ + V EQ L + + + W+ N N+ DIS RG+++ G+
Sbjct: 196 VSIGVLFRGKPAASTVVEQSLLVTGFGYEHDDAWVTNINLFKEYTDIS-RGVRRLGS 251
>10_08_0068 + 14624376-14624975,14625113-14625601
Length = 362
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = -3
Query: 174 AAAEDG---SDGEVAA-VARVTGGHHVLGVEHLLRELGYSQGTVLSASTGCEGSETWH 13
AAA DG S G +A VA GHHVL + G + + G TWH
Sbjct: 8 AAASDGASSSSGSASAIVAGTVNGHHVLKIVGYSFTKAVPSGKSIRSRPFRAGGHTWH 65
>06_02_0048 - 10943553-10944050
Length = 165
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -3
Query: 189 LLHGHAAAEDGSDGEVAAVARVTGGHHVLG-----VEHLLRELGYSQGTVLSASTGCEGS 25
LL A +DG D AA+ RV H+LG + L + G +G + +AS G G
Sbjct: 31 LLGAPADGDDGGDQARAALLRVEELEHLLGDVARRLSRLDAKRGRLEGQIAAASRGRRGG 90
Query: 24 ETWH 13
H
Sbjct: 91 GAHH 94
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +1
Query: 34 TSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNI 213
+ R S Q A Q+ + + C R +LT FR + V + N+
Sbjct: 72 SGRCSEQEHAKLGERDQQEWLSGERFLTDCKRRESPFLTRRERFRNEFMRRVVPWEKGNL 131
Query: 214 QNKNFSYFVEWIPNNVKTGVC 276
+NF Y+V++ + +C
Sbjct: 132 TWQNFPYYVKYDARTTCSVLC 152
>02_05_0933 +
32846658-32846729,32847038-32847133,32847243-32847411,
32847608-32847669,32848364-32849320,32850036-32850119,
32850307-32850595,32850645-32850694
Length = 592
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 18 RFRSPHIPWKQTVPCLDCTRAHATDVRRQEHDG 116
R RS IP+ P ++CT A A DV E +G
Sbjct: 443 RPRSNFIPFLDPEPSVECTEAPAADVVNLEKEG 475
>01_05_0555 - 23231327-23231547,23232103-23232232,23233260-23233724
Length = 271
Score = 27.5 bits (58), Expect = 3.3
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 192 DLLHGHAAAEDGSDGEVAAVARVTGGHHVLGVEHLLRELGYSQGTVLSASTGCEG 28
D L GH + D + AV R + G HV E R+ G V G EG
Sbjct: 50 DYLPGHPRPDAKHDELILAVPRASSGRHVAAKE---RKAGRVPAIVFEQENGQEG 101
>11_06_0415 + 23306555-23306794,23306842-23307684
Length = 360
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 135 VARVTGGHHVLGVEHLLRELGYSQGTVLSASTGCEGSETWH 13
VA + G HVL V+ G + G + + T G +WH
Sbjct: 25 VAEMATGSHVLTVDGYSGTKGLAVGVHVKSGTFVAGGHSWH 65
>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
Length = 614
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 174 AAAEDGSDGEVAAVARVTG-GHHVLGVEHLLRELGYSQGTVLSASTGCEGSETWH 13
A+A DGS + V + +HVL + L + LS+ G TWH
Sbjct: 11 ASAGDGSPSSRSTVTTIAAQAYHVLKINGYSNTLEAGRHHALSSCPFSAGGHTWH 65
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 46 SRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNK 222
SR + + V ++ + A+ M+ A GR+ ++ ++F R+ +++ + QN+
Sbjct: 1147 SRLAQEIPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLGWHDLEGLVAKFQNR 1205
>10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331
Length = 176
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 81 ELGYSQGTVLSASTGCEGSETWHEE 7
E+G +QG V S S G TW EE
Sbjct: 29 EVGTAQGGVASGSAAGGGRPTWREE 53
>06_01_0769 - 5745324-5746970
Length = 548
Score = 26.6 bits (56), Expect = 5.7
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 237 KV*EVLVLNVKHLLVDLLHGHAAAEDGSDGEVAAVARVT--GGHHVLGVEHLLREL 76
KV VLV+++K D LHG + GEV AV + + G H H R L
Sbjct: 397 KVKAVLVVSLKREYYDKLHGAYYTNATASGEVVAVYQPSHDGDQHTEARAHNERAL 452
>10_08_0839 + 20940847-20941329
Length = 160
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 210 VKHLLVDLLHG----HAAAEDGSDGEVAAVARVTGGHHVLGVEHLLRELG 73
V+ L+++L HG AA G G AA + V G H GV+ E G
Sbjct: 109 VRWLVIELQHGAGGASAAGPGGGGGAAAAASGVAGQHGHGGVDTRFPEDG 158
>08_02_1268 - 25751744-25752637
Length = 297
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 201 LLVDLLHGHAAAEDGSDGEVAAVARVTGGHHVLGVEHLLRE 79
LL+ ++ GH AA +DG V +A + G H E LR+
Sbjct: 14 LLLTIISGHLAAPATADGYVGGLA-IYWGRHADADEGTLRQ 53
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 175 MSMKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQ 339
++MKE+DE++ + ++ Y ++ I N G + PR L T + GI+
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKT-LAELVGIE 172
>07_03_0457 -
18404577-18405193,18405317-18405563,18405734-18405953,
18406239-18406333
Length = 392
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 142 YLTVAAIFRGRMSMKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRG 294
Y + A + R +++ +Q+ N +Y+V W+ N +TG I +G
Sbjct: 144 YQNLKAKYFQRANLRHSTKQIKNRFTHLKNYYVAWVWLNQQTGAVSIQEKG 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,831,560
Number of Sequences: 37544
Number of extensions: 219136
Number of successful extensions: 836
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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