Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3897
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 228 8e-61
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 222 7e-59
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 222 7e-59
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 219 6e-58
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 217 2e-57
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 216 4e-57
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 111 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 111 2e-25
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 9e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 9e-16
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 9e-16
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 9e-16
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 78 2e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 78 2e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 78 2e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 78 2e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 75 1e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 75 1e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 74 3e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 73 4e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 73 6e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 69 7e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 7e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 28 2.2
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z50795-3|CAA90664.1| 200|Caenorhabditis elegans Hypothetical pr... 26 8.9
U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical pr... 26 8.9
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 26 8.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 228 bits (558), Expect = 8e-61
Identities = 104/118 (88%), Positives = 110/118 (93%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPLTSRGS+QYR+LTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMS
Sbjct: 263 LHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
MKEVDEQMLN+QNKN SYFVEWIPNNVKT VCDI PRG+K A TF+GN T IQEL KR
Sbjct: 323 MKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKR 380
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 222 bits (542), Expect = 7e-59
Identities = 102/118 (86%), Positives = 107/118 (90%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMS
Sbjct: 263 LHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
MKEVDEQMLNIQNKN SYFV+WIPNNVKT VCDI PRGLK + TFIGN T IQEL KR
Sbjct: 323 MKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKR 380
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 222 bits (542), Expect = 7e-59
Identities = 102/118 (86%), Positives = 107/118 (90%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMS
Sbjct: 263 LHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
MKEVDEQMLNIQNKN SYFV+WIPNNVKT VCDI PRGLK + TFIGN T IQEL KR
Sbjct: 323 MKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKR 380
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 219 bits (534), Expect = 6e-58
Identities = 99/118 (83%), Positives = 108/118 (91%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMS
Sbjct: 263 LHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
M+EVDEQMLN+QNKN SYFVEWIPNNVKT VCDI PRGLK A TF+GN T IQEL KR
Sbjct: 323 MREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKR 380
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 217 bits (529), Expect = 2e-57
Identities = 98/118 (83%), Positives = 108/118 (91%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMS
Sbjct: 263 LHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
M+EVDEQML++QNKN SYFVEWIPNNVKT VCDI PRGLK A TF+GN T IQEL KR
Sbjct: 323 MREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKR 380
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 216 bits (527), Expect = 4e-57
Identities = 97/118 (82%), Positives = 108/118 (91%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMS
Sbjct: 263 LHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMS 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
M+EVD+QM+N+QNKN SYFVEWIPNNVKT VCDI PRGLK + TFIGN T IQEL KR
Sbjct: 323 MREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKR 380
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 111 bits (266), Expect = 2e-25
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ +
Sbjct: 262 LHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQT 320
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
K+ EQ+++++N++ S +E +P + T VCDI RGLK + TFI N T IQE +KR
Sbjct: 321 EKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKR 378
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 111 bits (266), Expect = 2e-25
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
LHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ +
Sbjct: 262 LHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQT 320
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGVCDISPRGLKKAGTFIGNFTGIQELVKR 354
K+ EQ+++++N++ S +E +P + T VCDI RGLK + TFI N T IQE +KR
Sbjct: 321 EKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKR 378
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 79.0 bits (186), Expect = 9e-16
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 265 IHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 79.0 bits (186), Expect = 9e-16
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 264 IHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVV 323
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 324 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 354
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 79.0 bits (186), Expect = 9e-16
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 265 IHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 79.0 bits (186), Expect = 9e-16
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 265 IHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 325 PKDVNAAIATIKTKRSIQFVDWCPTGFKVGI 355
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 78.2 bits (184), Expect = 2e-15
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 263 IHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 78.2 bits (184), Expect = 2e-15
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 263 IHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 78.2 bits (184), Expect = 2e-15
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 263 IHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 78.2 bits (184), Expect = 2e-15
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 263 IHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAIAAIKTKRTIQFVDWCPTGFKVGI 353
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.9 bits (176), Expect = 1e-14
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG +
Sbjct: 263 IHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.9 bits (176), Expect = 1e-14
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG +
Sbjct: 263 IHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVV 322
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + I+ K FV+W P K G+
Sbjct: 323 PKDVNTAITAIKTKRSVQFVDWCPTGFKVGI 353
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 74.1 bits (174), Expect = 3e-14
Identities = 30/91 (32%), Positives = 51/91 (56%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + +TV E+TQQ F+ M CDPR G+Y+ ++RG +
Sbjct: 270 IHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVV 329
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + +++ K FV+W P K G+
Sbjct: 330 PKDVNAAIASVKTKRSIQFVDWCPTGFKVGI 360
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 73.3 bits (172), Expect = 4e-14
Identities = 31/91 (34%), Positives = 53/91 (58%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + + PL S ++ L+V E+T+ F+A N M CDP+HG+Y+ V ++RG +
Sbjct: 262 IHFPLVAYNPLISSAHHEF--LSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVV 319
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V + +I+ + FV+W P K G+
Sbjct: 320 PKDVSAAIKSIKTQRSVQFVDWCPTGFKVGL 350
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 72.9 bits (171), Expect = 6e-14
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + L+V E+T F+ + M CDPR+G+Y+ ++RG +
Sbjct: 265 IHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVV 324
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV----CDISPRG----LKKAGTFIGNFTGI 336
KE++ + I+ K FV+W P K G+ + P G L++A + N T I
Sbjct: 325 PKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAI 384
Query: 337 QE 342
QE
Sbjct: 385 QE 386
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 69.3 bits (162), Expect = 7e-13
Identities = 29/91 (31%), Positives = 48/91 (52%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +APL S + TV ++T F+ M CDPR G+Y+ V ++RG +
Sbjct: 271 IHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVV 330
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+++ + ++ K FVEW P K G+
Sbjct: 331 PKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 361
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 69.3 bits (162), Expect = 7e-13
Identities = 29/91 (31%), Positives = 48/91 (52%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +APL S + TV ++T F+ M CDPR G+Y+ V ++RG +
Sbjct: 243 IHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVV 302
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+++ + ++ K FVEW P K G+
Sbjct: 303 PKDINSAIAAVKTKRTVQFVEWCPTGFKVGI 333
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.5 bits (160), Expect = 1e-12
Identities = 28/91 (30%), Positives = 50/91 (54%)
Frame = +1
Query: 1 LHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMS 180
+HF + +AP+ S + L+V ++T F+ N M CDP G+Y+ V ++RG +
Sbjct: 268 IHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVV 327
Query: 181 MKEVDEQMLNIQNKNFSYFVEWIPNNVKTGV 273
K+V+ + +++ K FV+W P K G+
Sbjct: 328 PKDVNAAISSVKAKRGINFVDWCPTGFKVGI 358
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -3
Query: 279 VAHAGFHVVGDPFHKV*EVLVLNVKHLLVDLLHGHAA--AEDGSDGEVAAVARVTGGHHV 106
+ GF++V P++ E+ + LL+ + GH AE G + A +GG
Sbjct: 671 IQRKGFYIVDQPYNPKSELSGVETPLLLIAIPDGHTGKEAEKPPKGAPVSAAASSGGSDA 730
Query: 105 LGVEHLLRELG 73
L + + + + G
Sbjct: 731 LQLYNSIEQQG 741
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical protein
F40F4.6 protein.
Length = 2214
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 321 SNKGAGLLEPTRGNVAHAGFHVVGDPFHK 235
S++ ++PT G A FH+ G+PFH+
Sbjct: 1856 SHQDGRFVQPTAGFDNVAVFHLAGNPFHR 1884
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 318 NKGAGLLEPTRGNVAHAGFHVVGDPFHKV*EVLVLNVKHLLVDLLHGHAAAE 163
NK A +E TR + H ++ +V + + VK +L DLLH H E
Sbjct: 516 NKSA--VELTRASRLHTRLFIIEAFMRRVSRIEDIPVKEVLTDLLHLHVNYE 565
>Z99710-3|CAB16864.1| 679|Caenorhabditis elegans Hypothetical
protein F08A8.2 protein.
Length = 679
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 318 NKGAGLLEPTRGNVAHAGFHVVGDPFHKV*EVLVLNVKHLLVDLLHGHAAAE 163
NK A +E TR + H ++ +V + + VK +L DLLH H E
Sbjct: 535 NKSA--VELTRASRLHTRLFIIEAFMRRVSRIEDIPVKEVLTDLLHLHVNYE 584
>Z50795-3|CAA90664.1| 200|Caenorhabditis elegans Hypothetical
protein R166.3 protein.
Length = 200
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 135 VARVTGGHHVLGVEHLLRELGY 70
VA+ G +HV ++HL+R+ GY
Sbjct: 137 VAQEQGWNHVETIDHLIRKSGY 158
>U53181-7|AAA93487.1| 472|Caenorhabditis elegans Hypothetical
protein F36D4.4 protein.
Length = 472
Score = 25.8 bits (54), Expect = 8.9
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = -1
Query: 248 IHSTKY--EKFLF*MLSICSSTSFMDMRPRKMAATVR*RPW-----RGSQAAI--MFLAS 96
+H +Y KF+ +L+IC + S M +++ W RG A M L S
Sbjct: 139 LHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLPPEERGIDFATITMVLIS 198
Query: 95 NICCVSSGTVKARYCLLPRDVRGAK 21
++C V+ GTV Y + R +R K
Sbjct: 199 SLCFVTLGTVVICYISILRTIRKFK 223
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 148 TVAAIFRGRMSMKEVDEQMLNIQNKNFSYFVEW 246
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,631,131
Number of Sequences: 27780
Number of extensions: 166045
Number of successful extensions: 591
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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