Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3897
         (356 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   7.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   7.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 293 PRGEMSHTPVFTLLGIHSTKYEKFLF 216
           PRGE+    VFT    +ST   K L+
Sbjct: 200 PRGELFDATVFTYNITNSTPLLKKLY 225


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 293 PRGEMSHTPVFTLLGIHSTKYEKFLF 216
           PRGE+    VFT    +ST   K L+
Sbjct: 215 PRGELFDATVFTYNITNSTPLLKKLY 240


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -3

Query: 210 VKHLLVDLLHGHAAAEDGSDGEVAAVARVTGGHHVLGVEHLLRELGYSQGTVLSASTG 37
           V + LVDL+  HA AE   + +     ++   H +  ++ +   L  + G  L  + G
Sbjct: 243 VFNTLVDLVPKHACAEYRRNFKKMQEEKIFEPHRIPQLQEVSEFLKKNTGFTLRPAAG 300


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 326 KFPIKVPAFLSPRGEM 279
           K   K P+F+SPR ++
Sbjct: 754 KHSAKRPSFISPRSQL 769


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,420
Number of Sequences: 438
Number of extensions: 2103
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)