Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3891
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical pr... 36 0.011
AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein... 36 0.011
U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 29 2.1
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 29 2.1
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 3.7
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 3.7
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z49153-1|CAA89022.1| 293|Caenorhabditis elegans Hypothetical pr... 27 6.5
U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical pr... 27 6.5
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 8.6
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 8.6
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 8.6
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 8.6
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 8.6
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 8.6
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 8.6
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 8.6
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 8.6
>Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical
protein C03C11.2 protein.
Length = 263
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 325 TARESGVPLPDVLKHLPRDLAVWVDPSEVSYRIGEKG 435
+A E+GVP DVL+ LP ++ ++ +P V R+ E G
Sbjct: 69 SAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENG 105
Score = 33.1 bits (72), Expect = 0.099
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 107 MHIEVQVALNFVISYLYNKLPRRRVNIF 190
M+ EV+ +NFV YL+ +PRR V IF
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIF 28
>AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein
protein.
Length = 263
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 325 TARESGVPLPDVLKHLPRDLAVWVDPSEVSYRIGEKG 435
+A E+GVP DVL+ LP ++ ++ +P V R+ E G
Sbjct: 69 SAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENG 105
Score = 33.1 bits (72), Expect = 0.099
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 107 MHIEVQVALNFVISYLYNKLPRRRVNIF 190
M+ EV+ +NFV YL+ +PRR V IF
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIF 28
>U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical
protein T09B4.6 protein.
Length = 192
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 107 MHIEVQVALNFVISYLYNKLPRRRVNIFRG 196
M +EVQ A+ F+ ++++ ++PR RV F G
Sbjct: 1 MILEVQEAVQFLSTFMFGRIPRSRVKSFCG 30
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 334 PSPFFQAVDPSGPPVFRHXNAEPRARSVRGTK*PPEICP*VPSLILPPKDVDSPSWQL 161
PSPF+Q+ + P + A P + PP I P PS + P V +PS+ L
Sbjct: 75 PSPFYQSGWSNPIPSYASAPALPSYSTAYSMAPPPLILPSSPSYVAP---VSAPSYSL 129
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 306 PVGLQFSGXGTQSPGHGLSGVPND 235
P GL G GTQ P HG+ +PND
Sbjct: 124 PEGLNNFGLGTQRPNHGV--IPND 145
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 306 PVGLQFSGXGTQSPGHGLSGVPND 235
P GL G GTQ P HG+ +PND
Sbjct: 124 PEGLNNFGLGTQRPNHGV--IPND 145
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 306 PVGLQFSGXGTQSPGHGLSGVPND 235
P GL G GTQ P HG+ +PND
Sbjct: 122 PEGLNNFGLGTQRPNHGV--IPND 143
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 306 PVGLQFSGXGTQSPGHGLSGVPND 235
P GL G GTQ P HG+ +PND
Sbjct: 73 PEGLNNFGLGTQRPNHGV--IPND 94
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 32 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 142
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z49153-1|CAA89022.1| 293|Caenorhabditis elegans Hypothetical
protein C32A9.1 protein.
Length = 293
Score = 27.1 bits (57), Expect = 6.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 272 CVPMPENWRPTGIHCLKK 325
C+P+PE P+ C+KK
Sbjct: 263 CIPVPEELEPSNFTCIKK 280
>U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical
protein C43G2.1 protein.
Length = 434
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 180 STSFGGRIREGTQGQISGGHLVPRTDRARG 269
+TSF GRIR G+ + H + R R +G
Sbjct: 84 ATSFAGRIRAGSDDEAMPKHTILRYRRKKG 113
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1687 KWIGIGKRLNRQNTLNPGHRLYGTSN 1712
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1668 KWIGIGKRLNRQNTLNPGHRLYGTSN 1693
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1724 KWIGIGKRLNRQNTLNPGHRLYGTSN 1749
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1678 KWIGIGKRLNRQNTLNPGHRLYGTSN 1703
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1678 KWIGIGKRLNRQNTLNPGHRLYGTSN 1703
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1687 KWIGIGKRLNRQNTLNPGHRLYGTSN 1712
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1678 KWIGIGKRLNRQNTLNPGHRLYGTSN 1703
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1668 KWIGIGKRLNRQNTLNPGHRLYGTSN 1693
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 315 QWIPVGLQFSGXGTQSPGHGLSGVPN 238
+WI +G + + T +PGH L G N
Sbjct: 1724 KWIGIGKRLNRQNTLNPGHRLYGTSN 1749
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,238
Number of Sequences: 27780
Number of extensions: 295518
Number of successful extensions: 652
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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