Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3891
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   2.1  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    21   4.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   6.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.4  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 300 GLQFSGXGTQSPGHGLSGVPNDPLKFA 220
           G QF+   T SP  G  GVP   ++ A
Sbjct: 387 GAQFATPCTPSPPRGPGGVPTSVIQAA 413


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 248 PDRPCPGLCVPMPENWRP 301
           PD+  PG+ V   E+WRP
Sbjct: 132 PDKSFPGVGVIDFESWRP 149


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 206 RRHSRANFRGSFGTPDRPCP 265
           RR  R++ RG+ GTP+   P
Sbjct: 4   RRVKRSDGRGNGGTPEEKRP 23


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 55  WQAPSIFSIRLFTSA 99
           W AP   + R FTSA
Sbjct: 804 WTAPEAIAFRKFTSA 818


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +1

Query: 196 EELEKALKGKFQGVIWYPGQTVPGALRSXA*KLEAHWDPLLEKTARESGVP 348
           EE+ +   G       + G+  P A++S     E+HW+ L  +      +P
Sbjct: 598 EEIGRGQYGIVFACDGWGGKAGPCAIKSVVPSDESHWNDLAMEFYYNRSIP 648


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +1

Query: 196 EELEKALKGKFQGVIWYPGQTVPGALRSXA*KLEAHWDPLLEKTARESGVP 348
           EE+ +   G       + G+  P A++S     E+HW+ L  +      +P
Sbjct: 636 EEIGRGQYGIVFACDGWGGKAGPCAIKSVVPSDESHWNDLAMEFYYNRSIP 686


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 251 DRPCPGLCVPMPEN 292
           D+P P  C   PEN
Sbjct: 156 DKPIPASCCNSPEN 169


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 327 RFFKQWIPVGLQFS 286
           RFFK W+  GL  S
Sbjct: 116 RFFKPWLGDGLLIS 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,398
Number of Sequences: 438
Number of extensions: 3583
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)