Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3872
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058677-1|AAL13906.1|  360|Drosophila melanogaster LD38670p pro...   120   2e-27
AE014298-1826|AAF48214.2|  360|Drosophila melanogaster CG4645-PA...   120   2e-27
AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-P...    35   0.097
AE014296-415|AAF47615.1|  485|Drosophila melanogaster CG13810-PA...    33   0.39 
AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA...    29   8.5  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   8.5  

>AY058677-1|AAL13906.1|  360|Drosophila melanogaster LD38670p
           protein.
          Length = 360

 Score =  120 bits (290), Expect = 2e-27
 Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = +3

Query: 9   LWGVLKWTTLP-DGQDEIETQTSN-SPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWL 182
           LW + K++  P D  D +ET +++  PS++SL C+YGYSL+IYIPV+I W I IS LQWL
Sbjct: 210 LWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPVSILWVINISLLQWL 269

Query: 183 FVLMAAFVSGAVLIFWLLPALKKSKYFYMLVGSILAFHFLLATGFMLYFF 332
            V+ AA +SG VLI  L PAL+ S++   L+  IL+ H +LA GF+LYFF
Sbjct: 270 LVITAALLSGTVLIAVLTPALRNSQFSLFLIVGILSAHVVLAAGFLLYFF 319


>AE014298-1826|AAF48214.2|  360|Drosophila melanogaster CG4645-PA
           protein.
          Length = 360

 Score =  120 bits (290), Expect = 2e-27
 Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = +3

Query: 9   LWGVLKWTTLP-DGQDEIETQTSN-SPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWL 182
           LW + K++  P D  D +ET +++  PS++SL C+YGYSL+IYIPV+I W I IS LQWL
Sbjct: 210 LWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPVSILWVINISLLQWL 269

Query: 183 FVLMAAFVSGAVLIFWLLPALKKSKYFYMLVGSILAFHFLLATGFMLYFF 332
            V+ AA +SG VLI  L PAL+ S++   L+  IL+ H +LA GF+LYFF
Sbjct: 270 LVITAALLSGTVLIAVLTPALRNSQFSLFLIVGILSAHVVLAAGFLLYFF 319


>AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-PA
           protein.
          Length = 123

 Score = 35.1 bits (77), Expect = 0.097
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 165 SWLQWLFVLMAAFVSGAV-LIFWLLPALKKSKYFYMLVGSILAFHFLLATGFMLYFFSRT 341
           S L+W FVL A F   A+    W+  A +     + ++ S  AF F LAT  +L F+   
Sbjct: 26  SSLRWRFVLGAIFACSAISACHWVRDAKESESVVFQILSSQSAFAFSLATICLLIFYGFN 85

Query: 342 KRSKR 356
             +K+
Sbjct: 86  HATKQ 90


>AE014296-415|AAF47615.1|  485|Drosophila melanogaster CG13810-PA
           protein.
          Length = 485

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
 Frame = +3

Query: 81  PSMISLFCLY--GYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKS 254
           P ++ L CL+  G+SL  Y   A  +     W  W + L+   V+ A+ + W L   KK 
Sbjct: 16  PDLLVLGCLWASGFSLGYYAKSA--YVYDNLWPHW-YALVGGLVALALTLGWTLRKHKKQ 72

Query: 255 KY--------FYMLVGSILAFHFLLATGFML-YFFS 335
           +Y        FY L+ S++   F+L     + Y+FS
Sbjct: 73  QYSYDHYYIIFYGLLCSLMGSCFMLTRQLAVSYYFS 108


>AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA
            protein.
          Length = 1660

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +3

Query: 132  IPVAIFWTIQISWLQWLFVLMAAFVSGAVLIF---WLLPALKKSKYFYMLV 275
            + V  +WT  I W   +FVL A      +  F     +  L  S+YFYML+
Sbjct: 1050 VDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPLDLSRYFYMLL 1100


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 298   SCWQLVLCYTSFHGPNAVSAPGVPVTPVSG 387
             SC    LC+ S H P  +  PG    P SG
Sbjct: 10229 SCGNNALCHVSLHAPVCMCEPGYSGDPFSG 10258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,984,147
Number of Sequences: 53049
Number of extensions: 756657
Number of successful extensions: 2318
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2314
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)