Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3872
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    75   4e-14
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    75   4e-14
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    75   4e-14
Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical pr...    31   0.63 
Z70208-1|CAA94141.1|  339|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z98851-2|CAB11536.1|  324|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 90  ISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKSKYFYM 269
           + L CLYGYSL+I+IPV++ W + I W +W  +  +  +SG VL   + PA++      +
Sbjct: 190 VDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMI 249

Query: 270 LVG---SILAFHFLLATGFMLYFF 332
             G   S++  HFLLA  F +YFF
Sbjct: 250 AFGTVISVVVLHFLLAFTFKVYFF 273


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 90  ISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKSKYFYM 269
           + L CLYGYSL+I+IPV++ W + I W +W  +  +  +SG VL   + PA++      +
Sbjct: 180 VDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMI 239

Query: 270 LVG---SILAFHFLLATGFMLYFF 332
             G   S++  HFLLA  F +YFF
Sbjct: 240 AFGTVISVVVLHFLLAFTFKVYFF 263


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 90  ISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKSKYFYM 269
           + L CLYGYSL+I+IPV++ W + I W +W  +  +  +SG VL   + PA++      +
Sbjct: 180 VDLVCLYGYSLAIFIPVSVLWIVDIGWFRWALIFASVGLSGTVLARAIWPAVQNDNNKMI 239

Query: 270 LVG---SILAFHFLLATGFMLYFF 332
             G   S++  HFLLA  F +YFF
Sbjct: 240 AFGTVISVVVLHFLLAFTFKVYFF 263


>Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical
           protein M01B2.3 protein.
          Length = 284

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = +3

Query: 138 VAIFWTIQISWLQWLFVLMAAFVSGAV--LIFWLLPALKKSKYFYMLVGSILAFHFLLAT 311
           V + +T+ ++ L + ++L++   +  +  L FWL+ A         L+  +++F  +LAT
Sbjct: 51  VDVVYTLNLTTLMFYYLLISLSANFIIKNLTFWLVWASTSIGSMRSLLALLISFERVLAT 110

Query: 312 GFMLYFFSRTKR 347
            F +YF    +R
Sbjct: 111 YFPIYFHKYRQR 122


>Z70208-1|CAA94141.1|  339|Caenorhabditis elegans Hypothetical
           protein F54B11.1 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 564 HTGPPDGEWLPSAHGLQAMPGAEPSRCLP 478
           H G P     P  HG+  MPG   S C P
Sbjct: 151 HPGKPGRPGRPGGHGMPGMPGLGASPCQP 179


>U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical
           protein R12C12.9a protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 177 WLFVLMAAFVSGAVLIFWLLPALKKSKY 260
           WL +L  A++SG +L+F  LP   K  +
Sbjct: 205 WLDILFIAYISGHILVFLSLPFFNKKLF 232


>U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical
           protein R12C12.9b protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 177 WLFVLMAAFVSGAVLIFWLLPALKKSKY 260
           WL +L  A++SG +L+F  LP   K  +
Sbjct: 200 WLDILFIAYISGHILVFLSLPFFNKKLF 227


>Z68160-4|CAA92292.1|  583|Caenorhabditis elegans Hypothetical
           protein D1046.4 protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +3

Query: 165 SWLQWLFVLMAAFVSGAVLIFWLLPALKKSKY 260
           +W +W++++ A  + G+V++FWL    +KS +
Sbjct: 461 NW-RWIWLVFAVLLIGSVILFWLTFQFEKSDW 491


>Z98851-2|CAB11536.1|  324|Caenorhabditis elegans Hypothetical
           protein H12I19.2 protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
 Frame = +3

Query: 258 YFYMLVGSILAFH---FLLATG-FMLYFFSRTKRS 350
           + Y++   I  +H   FLLA G F+LYFF +TK +
Sbjct: 107 FLYIMYLIIQVYHLLIFLLAVGRFLLYFFPKTKET 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,299,229
Number of Sequences: 27780
Number of extensions: 384662
Number of successful extensions: 1364
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)