Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3867
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 289 1e-78
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 268 3e-72
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 187 6e-48
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 110 1e-24
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 85 5e-17
12_02_0592 + 20868884-20868954,20869091-20869216,20869554-208698... 41 0.001
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 32 0.45
08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153... 31 0.79
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 31 1.0
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587... 31 1.0
01_06_1245 - 35693949-35694038,35694974-35695070,35695170-356952... 30 1.8
09_06_0315 - 22246879-22247643,22247722-22247862,22248509-222485... 29 2.4
01_07_0202 + 41964448-41965104 28 5.6
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588... 28 7.4
05_06_0141 - 25964706-25965473 27 9.7
05_04_0295 + 19940822-19940906,19940976-19941902,19941956-19942866 27 9.7
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 289 bits (710), Expect = 1e-78
Identities = 125/188 (66%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
Frame = +3
Query: 33 IKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFEST 212
I+Y+KNEVFLDV+ESVN+L NSNG ++RS++VGA+KMR YLSGMPE +LGLND+VL E+
Sbjct: 167 IRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQ 226
Query: 213 GRG-KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESV 389
GR K K+++L+D+KFHQCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+E+
Sbjct: 227 GRATKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQ 286
Query: 390 IERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAIT 569
IE+H+ SR+E M+KA+SQFK RSTA NVEI +PVP+DA +P +T++GS Y PE++A+
Sbjct: 287 IEKHSRSRIELMVKARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMV 346
Query: 570 WSIKSFPG 593
W +KSFPG
Sbjct: 347 WKVKSFPG 354
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 268 bits (656), Expect = 3e-72
Identities = 116/191 (60%), Positives = 158/191 (82%), Gaps = 1/191 (0%)
Frame = +3
Query: 24 VRSIKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLF 203
+++ YR EVFLDV+ESVN+L NSNG ++RS+++G +KMR +LSGMPE +LGLND+VL
Sbjct: 140 IKTDAYRM-EVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLL 198
Query: 204 ESTGRG-KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWI 380
E+ GR K K+++L+D+KFHQCVRL+RFENDRTISFIPPDG F+LM+YRL+T VKPLIW+
Sbjct: 199 EAQGRTTKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWV 258
Query: 381 ESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQN 560
E+ +E+H+ SR++ +K +SQFK RSTA NVEI +PVP D+ +P +T++GS Y PE++
Sbjct: 259 EAQVEKHSRSRIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERD 318
Query: 561 AITWSIKSFPG 593
A+ W IKSFPG
Sbjct: 319 AMVWKIKSFPG 329
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 187 bits (456), Expect = 6e-48
Identities = 89/198 (44%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Frame = +3
Query: 33 IKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFEST 212
+ Y+KNEVFLD++ESVNLL +S G+VLR ++ G I M+ +LSGMP+L+LGLNDK+ E
Sbjct: 173 LMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKE 232
Query: 213 GRGKS------KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLI 374
+ KS K++EL+DV FHQCV L+RF +++T+SF+PPDGEFELM YR+ V
Sbjct: 233 AQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPF 292
Query: 375 WIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPE 554
+ I+ +R+E +K KS F + A V + +PVP F+TT G KY
Sbjct: 293 RVLPTIKELGRTRMEINVKVKSVFGAKMFALGVVVKVPVPKQTAKTSFQTTSGKAKYNAS 352
Query: 555 QNAITWSIKSFPGRQGST 608
+++ W I+ FPG+ +T
Sbjct: 353 IDSLVWKIRKFPGQTEAT 370
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 110 bits (264), Expect = 1e-24
Identities = 59/151 (39%), Positives = 92/151 (60%), Gaps = 12/151 (7%)
Frame = +3
Query: 42 RKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRG 221
++ E+F+D+IE +++ +S+G +L SEI G I+M+ YL+G PE+RL LN+ + TG
Sbjct: 182 KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRTGSS 241
Query: 222 ----KSKS----VELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIW 377
+S S V L+D FH+ V L F+ DRT+ IPPDGEF +M+YR+ KP
Sbjct: 242 SYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLIPPDGEFAVMNYRITQEFKPPFR 301
Query: 378 IESVIERHAHSRV----EYMIKAKSQFKRRS 458
+ ++IE SR+ E+ ++AK F + S
Sbjct: 302 VTALIEEAGPSRIVGGSEHTLRAKLTFSQES 332
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 85.0 bits (201), Expect = 5e-17
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Frame = +3
Query: 33 IKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFEST 212
+K NEV+++++E ++ N G +++ E G I++ L G+PEL L ++ +
Sbjct: 180 VKDASNEVYVNIVEELDACVNREGALVKCEAYGKIQVNSSLPGVPELTLSFSNPTI---- 235
Query: 213 GRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIE-SV 389
+ DV+FH CVR +E+++ +SF+PPDG+FELMSYR+ I+++ +
Sbjct: 236 ---------INDVRFHPCVRFRPWESNQILSFVPPDGQFELMSYRVKKLKTTPIYVKPQL 286
Query: 390 IERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAIT 569
+ RV M+ K+ T +++ + +P S G+V +Q
Sbjct: 287 TSDSGNCRVNVMVGIKND--PGKTIDSITVQFRLPPLIASADLTANYGTVDILADQTCF- 343
Query: 570 WSIKSFP 590
W+I P
Sbjct: 344 WTIGQIP 350
>12_02_0592 +
20868884-20868954,20869091-20869216,20869554-20869862,
20870017-20870300,20870410-20871305,20871586-20871642,
20872293-20872340,20873046-20873114
Length = 619
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 123 IVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDR-T 299
+ G + R L G+P++ L L+ K+ +E FH CV+ S ND+ T
Sbjct: 331 VSGQVTCRAELEGLPDVSLPLSGL-----------KAARVEVSSFHHCVQASEPTNDKQT 379
Query: 300 ISFIPPDGEFELMSYRLNTHVKP 368
+ F PP G F LM Y+ + ++ P
Sbjct: 380 LIFQPPLGNFVLMHYQASCNMDP 402
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 465 NNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSI 578
+NV I IP+PA ++P + G KY + + WSI
Sbjct: 702 HNVVISIPLPALREAPSVRQIDGEWKYDSRNSVLEWSI 739
>08_02_0433 -
17114880-17114972,17115053-17115149,17115244-17115306,
17115765-17115918,17115992-17116178,17116567-17116871,
17117638-17117803,17118261-17118652,17119032-17119208,
17119565-17119604,17119762-17119809,17122393-17122428,
17122832-17123104
Length = 676
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 384 SVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNA 563
S++ + +EY +A F S V I IP+PA ++P+ + G KY +
Sbjct: 547 SILGNETYVNIEY--EASEMFDLHS----VIISIPLPALREAPRVRQIDGEWKYDSRNSV 600
Query: 564 ITWSI 578
+ WSI
Sbjct: 601 LEWSI 605
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +3
Query: 123 IVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTI 302
++G ++ R+ P LG K LF+ + ++L KF C+R+ + R I
Sbjct: 360 VLGKLRARMLAPDAPSYILGYELKELFQEVNNVDNAQLQLNPTKFFACIRVL---DARFI 416
Query: 303 SFIPPDGEFELMSYRLN 353
S D EL+ + LN
Sbjct: 417 SSDMQDSH-ELLCFLLN 432
>05_03_0443 +
14057080-14057201,14058566-14058698,14058758-14058797,
14059175-14059398,14059904-14059976,14060364-14060614,
14060892-14061060,14061307-14061611,14062023-14062209,
14062311-14062464,14063186-14063248,14063337-14063433,
14063530-14063619
Length = 635
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 465 NNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSI 578
+NV I IP+PA ++P + G +Y + + WSI
Sbjct: 528 HNVVISIPLPALREAPSVRQIDGEWRYDSRNSVLEWSI 565
>01_06_1245 -
35693949-35694038,35694974-35695070,35695170-35695232,
35696079-35696232,35696303-35696489,35697001-35697314,
35698079-35698220,35698445-35698656,35699068-35699244,
35699589-35699628,35700056-35700155,35701731-35701804
Length = 549
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 465 NNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSI 578
+NV I IP+PA ++P + G +Y + + WSI
Sbjct: 442 HNVVISIPLPALREAPGVRQIDGEWRYDSRNSVLEWSI 479
>09_06_0315 -
22246879-22247643,22247722-22247862,22248509-22248561,
22248755-22248919,22249685-22249799,22249937-22250025,
22250578-22250608
Length = 452
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 259 WNFTSSNSTDFDFPLPVLSNKTLS 188
W T SNSTDF P++ N L+
Sbjct: 152 WTITKSNSTDFSLTTPIVINTMLA 175
>01_07_0202 + 41964448-41965104
Length = 218
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 574 DHVIAFCSGVYLTLPIVVLNFGESASAG 491
DHV+ Y+ LPI V++ GE AG
Sbjct: 51 DHVVCAADSFYVGLPIPVVSAGEELMAG 78
>03_02_0142 +
5877480-5879663,5879783-5879898,5880749-5882419,
5882570-5882618,5882703-5882941,5883073-5883174,
5883634-5883862
Length = 1529
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 288 NDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTAN 467
N R S P +F S++L+ ++KP S + S E M+ + QFK R N
Sbjct: 685 NIRHSSGNPVPNQFPSQSHQLHNNLKPRFIPSSQASSNMASVNEKMLMREEQFKSRHVPN 744
Query: 468 N 470
+
Sbjct: 745 S 745
>05_06_0141 - 25964706-25965473
Length = 255
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 375 WIESVIERHAHSRVEYMIKAKSQF---KRRSTANNVEIIIPVPADADSPKF 518
W++ + E A + +E ++ A + K R +A++V ++P D D P F
Sbjct: 197 WVDGIDECDADAEMEELMFAMRELGLRKVRPSASSVTPVLPPVTDEDGPDF 247
>05_04_0295 + 19940822-19940906,19940976-19941902,19941956-19942866
Length = 640
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 33 IKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAI 137
I Y ++ L ++E+ NLL N G + ++GAI
Sbjct: 67 ITYLTQQLHLPLVEASNLLTNFTGTAAFTPVLGAI 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,249,750
Number of Sequences: 37544
Number of extensions: 280168
Number of successful extensions: 684
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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