Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3863
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002856-1|AAH02856.1|  985|Homo sapiens TXNDC11 protein protein.      39   0.013
AK027646-1|BAB55262.1|  958|Homo sapiens protein ( Homo sapiens ...    39   0.013
AK027464-1|BAB55129.1|  506|Homo sapiens protein ( Homo sapiens ...    39   0.013
AK074534-1|BAC11044.1|  210|Homo sapiens protein ( Homo sapiens ...    35   0.22 

>BC002856-1|AAH02856.1|  985|Homo sapiens TXNDC11 protein protein.
          Length = 985

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = +2

Query: 5   TRIEGMSCANNFSLYILAVDSIRNHHFAESLGV-NITNKKDMTSAVILDSKHESQYVL-- 175
           T   G+SC  N +L I  +DS     +AE LG  + T  K+   A I+D K ES Y+L  
Sbjct: 594 TNFTGLSCRTNKTLNIYLLDSNLFWLYAERLGAPSSTQVKEF--AAIVDVKEESHYILDP 651

Query: 176 SEDYNAKSIRDFIANFT--HKRLKRSL 250
            +     ++  FI NF+  +  LKR L
Sbjct: 652 KQALMKLTLESFIQNFSVLYSPLKRHL 678


>AK027646-1|BAB55262.1|  958|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14740 fis, clone NT2RP3002602, weakly similar to
           PROBABLE PROTEIN DISULFIDE ISOMERASE ER-60 PRECURSOR (EC
           5.3.4.1). ).
          Length = 958

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = +2

Query: 5   TRIEGMSCANNFSLYILAVDSIRNHHFAESLGV-NITNKKDMTSAVILDSKHESQYVL-- 175
           T   G+SC  N +L I  +DS     +AE LG  + T  K+   A I+D K ES Y+L  
Sbjct: 567 TNFTGLSCRTNKTLNIYLLDSNLFWLYAERLGAPSSTQVKEF--AAIVDVKEESHYILDP 624

Query: 176 SEDYNAKSIRDFIANFT--HKRLKRSL 250
            +     ++  FI NF+  +  LKR L
Sbjct: 625 KQALMKLTLESFIQNFSVLYSPLKRHL 651


>AK027464-1|BAB55129.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14558 fis, clone NT2RM2001997, weakly similar to
           PROTEIN DISULFIDE ISOMERASE PRECURSOR (EC 5.3.4.1). ).
          Length = 506

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = +2

Query: 5   TRIEGMSCANNFSLYILAVDSIRNHHFAESLGV-NITNKKDMTSAVILDSKHESQYVL-- 175
           T   G+SC  N +L I  +DS     +AE LG  + T  K+   A I+D K ES Y+L  
Sbjct: 115 TNFTGLSCRTNKTLNIYLLDSNLFWLYAERLGAPSSTQVKEF--AAIVDVKEESHYILDP 172

Query: 176 SEDYNAKSIRDFIANFT--HKRLKRSL 250
            +     ++  FI NF+  +  LKR L
Sbjct: 173 KQALMKLTLESFIQNFSVLYSPLKRHL 199


>AK074534-1|BAC11044.1|  210|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90053 fis, clone HEMBA1002985. ).
          Length = 210

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   TRIEGMSCANNFSLYILAVDSIRNHHFAESLGV-NITNKKDMTSAVILDSKHESQYVL 175
           T   G+SC  N +L I  +DS     +AE LG  + T  K+   A I+D K ES Y+L
Sbjct: 115 TNFTGLSCRTNKTLNIYLLDSNLFWLYAERLGAPSSTQVKEF--AAIVDVKEESHYIL 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,247,379
Number of Sequences: 237096
Number of extensions: 1296670
Number of successful extensions: 3411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3411
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)