Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3862
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016055-1|AAV36940.1|  494|Drosophila melanogaster LP16180p pro...    28   9.4  
AY051481-1|AAK92905.1|  468|Drosophila melanogaster GH14316p pro...    28   9.4  
AE014297-1628|AAF54900.2|  486|Drosophila melanogaster CG7966-PA...    28   9.4  

>BT016055-1|AAV36940.1|  494|Drosophila melanogaster LP16180p
           protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 169 LVHGPVANWSGDHSHY*GWGSKFQLYFDSGCIKPVPFR 282
           +VH    N  GD  H+ GW +    Y+     K VP R
Sbjct: 68  IVHRTFTNRKGDELHHSGWNACSSCYYVDESSKTVPKR 105


>AY051481-1|AAK92905.1|  468|Drosophila melanogaster GH14316p
           protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 169 LVHGPVANWSGDHSHY*GWGSKFQLYFDSGCIKPVPFR 282
           +VH    N  GD  H+ GW +    Y+     K VP R
Sbjct: 42  IVHRTFTNRKGDELHHSGWNACSSCYYVDESSKTVPKR 79


>AE014297-1628|AAF54900.2|  486|Drosophila melanogaster CG7966-PA
           protein.
          Length = 486

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 169 LVHGPVANWSGDHSHY*GWGSKFQLYFDSGCIKPVPFR 282
           +VH    N  GD  H+ GW +    Y+     K VP R
Sbjct: 60  IVHRTFTNRKGDELHHSGWNACSSCYYVDESSKTVPKR 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,680,092
Number of Sequences: 53049
Number of extensions: 540374
Number of successful extensions: 1208
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)