BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3860
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein. 33 1.3
BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3 pr... 31 3.9
AF466152-1|AAL79827.1| 1136|Homo sapiens partitioning-defective ... 31 3.9
AF428251-1|AAL30665.1| 1143|Homo sapiens partitioning-defective ... 31 3.9
AF428250-1|AAL30664.1| 1205|Homo sapiens partitioning-defective ... 31 3.9
AF276809-1|AAQ14318.1| 398|Homo sapiens Z-band alternatively sp... 31 3.9
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 31 3.9
AC007385-2|AAX76515.1| 190|Homo sapiens unknown protein. 31 3.9
AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively... 31 3.9
AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein. 31 3.9
BC139834-1|AAI39835.1| 415|Homo sapiens WDR32 protein protein. 30 9.0
BC108686-1|AAI08687.1| 412|Homo sapiens WDR32 protein protein. 30 9.0
BC011959-1|AAH11959.2| 320|Homo sapiens WDR32 protein protein. 30 9.0
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 30 9.0
AK074532-1|BAC11043.1| 412|Homo sapiens protein ( Homo sapiens ... 30 9.0
AK026854-1|BAB15574.1| 258|Homo sapiens protein ( Homo sapiens ... 30 9.0
>AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein.
Length = 283
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 149 LRLSRASPAYPRLRGWHHGLS 87
L+ R SP + +LR WHHGLS
Sbjct: 255 LKRKRNSPRFAKLRNWHHGLS 275
>BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3
protein.
Length = 283
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 137 RASPAYPRLRGWHHGLS 87
R SP + +LR WHHGLS
Sbjct: 259 RNSPRFAKLRNWHHGLS 275
>AF466152-1|AAL79827.1| 1136|Homo sapiens partitioning-defective
3-like protein splice variant c protein.
Length = 1136
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 1002 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 1057
>AF428251-1|AAL30665.1| 1143|Homo sapiens partitioning-defective
3-like protein splice variant b protein.
Length = 1143
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 1009 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 1064
>AF428250-1|AAL30664.1| 1205|Homo sapiens partitioning-defective
3-like protein splice variant a protein.
Length = 1205
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 1071 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 1126
>AF276809-1|AAQ14318.1| 398|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-6 protein.
Length = 398
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 137 RASPAYPRLRGWHHGLS 87
R SP + +LR WHHGLS
Sbjct: 374 RNSPRFAKLRNWHHGLS 390
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 31.1 bits (67), Expect = 3.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 137 RASPAYPRLRGWHHGLS 87
R SP + +LR WHHGLS
Sbjct: 306 RNSPRFAKLRNWHHGLS 322
>AC007385-2|AAX76515.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 56 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 111
>AB092439-1|BAC54285.1| 1205|Homo sapiens PAR3 beta alternatively
spliced form protein.
Length = 1205
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 1071 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 1126
>AB073472-1|BAC54035.1| 1104|Homo sapiens PAR3 beta protein.
Length = 1104
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 650 YNVAFEDLENRVKWMTRTGKADPTTTWIYGKRERERERENPLHINAYVIEPIRKAF 483
+N+ FE +E + + R G ADP R +ERE P + A+ + P + ++
Sbjct: 970 HNLRFEGMERQYASLPRGGPADPVDYLPAAPRGLYKERELPYYPGAHPMHPPKGSY 1025
>BC139834-1|AAI39835.1| 415|Homo sapiens WDR32 protein protein.
Length = 415
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 207 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 238
>BC108686-1|AAI08687.1| 412|Homo sapiens WDR32 protein protein.
Length = 412
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 204 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 235
>BC011959-1|AAH11959.2| 320|Homo sapiens WDR32 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 112 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 143
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 351 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 382
>AK074532-1|BAC11043.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ90051 fis, clone HEMBA1002551, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 412
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 204 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 235
>AK026854-1|BAB15574.1| 258|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23201 fis, clone KAIA38872. ).
Length = 258
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 402 SVLLTSSTGHRPRRTFSPCHDSDPVADSAKHCS 304
S L TSS+ PR + SPCH SD S KH S
Sbjct: 50 SDLTTSSSSSGPRVSGSPCHHSDS-NSSEKHMS 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,616,389
Number of Sequences: 237096
Number of extensions: 1997522
Number of successful extensions: 9035
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9027
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -