Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3859
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 336 2e-93
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 251 9e-68
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 244 8e-66
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 238 5e-64
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 229 3e-61
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 215 4e-57
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 159 3e-40
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 156 3e-39
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 153 3e-38
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 149 4e-37
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 142 6e-35
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 129 5e-31
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 127 1e-30
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 122 4e-29
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 116 3e-27
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 115 8e-27
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 113 2e-26
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 102 6e-23
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 100 4e-22
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 93 5e-20
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 56 5e-09
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.22
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.2
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 2.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.6
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 3.6
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 3.6
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 4.8
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.8
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 6.4
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 8.4
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 8.4
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 336 bits (826), Expect = 2e-93
Identities = 167/215 (77%), Positives = 187/215 (86%), Gaps = 2/215 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLAKAVANQTSATFLRVVGSELIQKYLGDGP+LVR+LF AEEH+PSIVFIDEI
Sbjct: 234 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEI 293
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGR 326
DA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D+KVIMATNRI LDPALIRPGR
Sbjct: 294 DAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGR 353
Query: 325 IDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
IDRKI F PDE TKR+IFTIHTS+M L +DVNL ELI KDDLSGA+IKAI +EAGL+A
Sbjct: 354 IDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLA 413
Query: 145 LRERRMKVTNEDFKKSKESVLYRKKEGTPE-GLYL 44
LRERRM+V +DF++++E VL K EG P GLY+
Sbjct: 414 LRERRMRVVMDDFRQAREKVLKTKDEGGPAGGLYI 448
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKGVILYG PG
Sbjct: 225 PKGVILYGAPG 235
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 251 bits (614), Expect = 9e-68
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLA+AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEI
Sbjct: 188 PGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 247
Query: 502 DAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 326
D++G+ R DS+ G G+ E+QRTMLELLNQLDGF++ ++KVIMATNRI+ LDPAL+RPGR
Sbjct: 248 DSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 307
Query: 325 IDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
IDRKIEFP P + + I IH+ M L ++L + + SGA++K +CTEAG+ A
Sbjct: 308 IDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFA 367
Query: 145 LRERRMKVTNEDFKKSKESVLYRKKEG 65
LRERR+ VT EDF+ + VL + G
Sbjct: 368 LRERRVHVTQEDFELAVAKVLNKGDSG 394
Score = 28.3 bits (60), Expect = 1.2
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKG++LYGPPG
Sbjct: 179 PKGILLYGPPG 189
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 244 bits (598), Expect = 8e-66
Identities = 112/205 (54%), Positives = 155/205 (75%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLA+A A Q++ATFL++ +L+Q ++GDG KLVR+ F +A+E +P+I+FIDE+
Sbjct: 228 PGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDEL 287
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKVI ATNR++TLDPAL+R GR+
Sbjct: 288 DAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRL 347
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
DRK+EFPLP+E+ + I IH+ +M + DD+N EL S D+ +GA +K++C EAG++AL
Sbjct: 348 DRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIAL 407
Query: 142 RERRMKVTNEDFKKSKESVLYRKKE 68
R+ K+ +E F V RK +
Sbjct: 408 RQGDTKINHEHFMDGILEVQMRKSK 432
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 710 PKGVILYGPPGHW*TTPGQGC 648
PKG +++GPPG T + C
Sbjct: 219 PKGCLMFGPPGTGKTLLARAC 239
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 238 bits (583), Expect = 5e-64
Identities = 110/196 (56%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK +L KAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A E+AP+I+FIDEI
Sbjct: 177 PGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEI 236
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+ TKR+D+ +G +RE+QR ++ELL Q+DGFD +VKVIMATNR +TLDPAL+RPGR+
Sbjct: 237 DAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRL 296
Query: 322 DRKIEFP-LPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
DRKIEFP D + +R +F T++M L+ +V+L IM D SGA I AI +AGL+A
Sbjct: 297 DRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLA 356
Query: 145 LRERRMKVTNEDFKKS 98
+R+ R + D +++
Sbjct: 357 VRKSRGVILQSDIEEA 372
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
P+GV+LYGPPG
Sbjct: 168 PRGVLLYGPPG 178
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 229 bits (560), Expect = 3e-61
Identities = 107/217 (49%), Positives = 150/217 (69%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK L A+AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEI
Sbjct: 222 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 281
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+G R+D +GG+ E+QRTMLEL+ QLDGFD RG++KV+ ATNR TLD AL+RPGRI
Sbjct: 282 DAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRI 341
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
DRK+EF LPD + + I IH M + D+ + +GA+++++CTEAG+ A+
Sbjct: 342 DRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAI 401
Query: 142 RERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL*MYS 32
R RR T +DF + + V+ ++ + Y+ M S
Sbjct: 402 RARRRVATEKDFLDAVQKVVKGNQKFSSTADYMNMSS 438
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKG++LYGPPG
Sbjct: 213 PKGIMLYGPPG 223
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 215 bits (526), Expect = 4e-57
Identities = 99/208 (47%), Positives = 142/208 (68%), Gaps = 1/208 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLA+AVA FL+VV S ++ KY+G+ +++RE+F A+EH P ++F+DEI
Sbjct: 175 PGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEI 234
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+G +R+ + +REIQRT++ELLNQ+DGFD G K+IMATNR +TLDPAL+RPGR+
Sbjct: 235 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRL 294
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
DRKIE PLP+E + I IH +++ +++ L+ D +GAD++ + TEAG +A+
Sbjct: 295 DRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAI 354
Query: 142 RERRMKVTNEDFKKSKESVLYRKK-EGT 62
+E R V D + V KK EGT
Sbjct: 355 KEDRDYVIQSDLMSAARKVADLKKLEGT 382
Score = 28.7 bits (61), Expect = 0.90
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKGV+LYGPPG
Sbjct: 166 PKGVLLYGPPG 176
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 159 bits (387), Expect = 3e-40
Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLAKA A + + FL V GSE ++ ++G GP VR+LF A ++AP I+FIDEI
Sbjct: 338 PGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEI 397
Query: 502 DAVGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 326
DA+G R G E + T+ +LL ++DGF S + V TNR + LDPAL+RPGR
Sbjct: 398 DAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGR 457
Query: 325 IDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNL--SELIMSKDDLSGADIKAICTEAGL 152
DR+I PD + +IF +H + AD+++L L + +GADI +C E L
Sbjct: 458 FDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGAL 517
Query: 151 MALRERRMKVTNEDFKKSKESV 86
+A R +V F+++ E V
Sbjct: 518 IAARSNSNEVQMVHFEQAIERV 539
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 156 bits (379), Expect = 3e-39
Identities = 76/183 (41%), Positives = 117/183 (63%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK L+A+AVAN+T A F + G E++ K G+ +R+ F AE+++P+I+FIDEI
Sbjct: 267 PGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 326
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D++ KR +N ER R + +LL +DG +R +V V+ ATNR ++DPAL R GR
Sbjct: 327 DSIAPKREKTNGEVER---RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRF 383
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
DR+++ +PD + I IHT M LADDV+L ++ G+D+ ++C+EA + +
Sbjct: 384 DREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQI 443
Query: 142 RER 134
RE+
Sbjct: 444 REK 446
Score = 144 bits (350), Expect = 9e-36
Identities = 76/198 (38%), Positives = 120/198 (60%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLAKA+AN+ SA F+ V G EL+ + G+ VR++F A AP +VF+DE+
Sbjct: 540 PGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDEL 599
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D++ R +++G R + +LL ++DG +S+ +V VI ATNR + +DPAL+RPGR+
Sbjct: 600 DSIAKAR-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRL 658
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
D+ I PLPDE+ + I +A+DV+L + + SGAD++ + A +A+
Sbjct: 659 DQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAI 718
Query: 142 RERRMKVTNEDFKKSKES 89
++ ED K+ E+
Sbjct: 719 KDS----IEEDIKRENET 732
Score = 26.2 bits (55), Expect = 4.8
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
P+G+++YGPPG
Sbjct: 258 PRGILMYGPPG 268
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 153 bits (370), Expect = 3e-38
Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
Frame = -3
Query: 709 PKESSCTVLPGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 530
P+ T PGTGK +LA+AVA + + F + GS+ + Y+G G K VRELF A + A
Sbjct: 300 PRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQA 359
Query: 529 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD----VKVIMATNRI 362
PSI+FIDE+DA+G KR N+ +++T+ +LL LDGF D V I ATN
Sbjct: 360 PSIIFIDELDAIGQKR---NARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFP 416
Query: 361 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGAD 182
E+LDPAL RPGR DR I PLPD + + I HT + L DV+LS + +GAD
Sbjct: 417 ESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGAD 476
Query: 181 IKAICTEAGLMALRERRMKVTNEDFKKSKESVL 83
+ + +A + A + V+ D + SK+ +L
Sbjct: 477 LANLINQAAVYASKNLSTAVSMRDLEWSKDRIL 509
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 713 LPKGVILYGPPG 678
LP+GV+L GPPG
Sbjct: 299 LPRGVLLTGPPG 310
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 149 bits (361), Expect = 4e-37
Identities = 72/182 (39%), Positives = 115/182 (63%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG K + AKA+A +T F+ V G EL K++G+ + VR++F+ A + +PS++F DEI
Sbjct: 591 PGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEI 650
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+ R + NS R + LLN+LDG ++ +V V+ ATNR + +DPAL+RPGR+
Sbjct: 651 DALTANRGEDNSS-----DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRL 705
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
DR + P+ + +++I I +M A+DV+L + + SGA++ A+C EAGL+A+
Sbjct: 706 DRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAM 765
Query: 142 RE 137
E
Sbjct: 766 HE 767
Score = 126 bits (303), Expect = 4e-30
Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 1/182 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK ++ +AVA + +A + G ++ KYLG+ +R++F A H PSI+FIDEI
Sbjct: 322 PGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEI 381
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+ KR + S E R + LL LDG + G V VI ATNR ++D AL RPGR+
Sbjct: 382 DALAPKRTEDVSEAE---SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRL 438
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
+++IE +PD+ + I + S + +D L +L GAD+ A+ EA L A
Sbjct: 439 EKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRA 498
Query: 145 LR 140
++
Sbjct: 499 IK 500
Score = 28.7 bits (61), Expect = 0.90
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKGV+LYGPPG
Sbjct: 582 PKGVLLYGPPG 592
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
P+GV+LYGPPG
Sbjct: 313 PRGVLLYGPPG 323
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 142 bits (343), Expect = 6e-35
Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG GK LLAKAVAN++ A F+ + G EL+ KY+G+ + VR++F A +P ++F DE+
Sbjct: 535 PGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDEL 594
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
DA+ +R DS S + T LL +LDG R V VI ATNR + +DPA++RPGR+
Sbjct: 595 DAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRL 651
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSK--DDLSGADIKAICTEAGLM 149
D+ + LPD + I T + L ++VNL L + + SGAD+ A+ EA +
Sbjct: 652 DKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVT 711
Query: 148 ALR 140
ALR
Sbjct: 712 ALR 714
Score = 116 bits (278), Expect = 5e-27
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG GK +LA A+AN+ F+ + ++ G+ K VRE+F A+ AP ++FIDEI
Sbjct: 217 PGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEI 276
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG-DVKVIMATNRIETLDPALIRPGR 326
DAV KR + ER I L +++L + G V VI ATNR ++LD AL R GR
Sbjct: 277 DAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGR 336
Query: 325 IDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
DR+I +P + + +I + L+ D + +L GAD+KA+ AG++A
Sbjct: 337 FDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIA 396
Query: 145 LR 140
++
Sbjct: 397 IK 398
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
P+GV+L+GPPG
Sbjct: 208 PRGVLLHGPPG 218
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 129 bits (311), Expect = 5e-31
Identities = 78/188 (41%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Frame = -3
Query: 682 PGTGKPLLAKAVA------NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 521
PGTGK L+A+ +A NQ + FLR GS+ + K++G+ + +R LF A PSI
Sbjct: 415 PGTGKTLMARVLAANCSTKNQKISFFLRK-GSDCLSKWVGEAERQLRLLFEEARRVQPSI 473
Query: 520 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
+F DEID + R I T+L L+ DG D+RG V VI ATNR LDPAL
Sbjct: 474 IFFDEIDGLAPIRSSKQEQTHSSIVSTLLALM---DGLDTRGQVVVIGATNRPNDLDPAL 530
Query: 340 IRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT-LADDVNLSELIMSKDDLSGADIKAICT 164
RPGR DR+ FPLP+++ + +I I++ + + L L S GAD+KA+CT
Sbjct: 531 RRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCT 590
Query: 163 EAGLMALR 140
EA L A+R
Sbjct: 591 EAALNAVR 598
Score = 28.7 bits (61), Expect = 0.90
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 691 TVLPGTGKPLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVF 515
T + G G L+K + + ++ + SEL+ L+ ++F A ++APSI+F
Sbjct: 712 TDIYGYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIF 771
Query: 514 IDEID 500
I+ ++
Sbjct: 772 INNVE 776
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 127 bits (307), Expect = 1e-30
Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSA-----TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 518
PGTGK L+A+A+A S+ +F G++ + K++G+ + +R LF A+ PSI+
Sbjct: 309 PGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSII 368
Query: 517 FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALI 338
F DEID + R I T+L L+ DG +SRG V +I ATNR + +DPAL
Sbjct: 369 FFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMESRGQVIIIGATNRPDAVDPALR 425
Query: 337 RPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKD-DLSGADIKAICTE 161
RPGR DR+ FPLPD +++I IHT L ++ K GAD++A+CTE
Sbjct: 426 RPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTE 485
Query: 160 AGLMALR 140
A L +++
Sbjct: 486 AALNSIK 492
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 679 GTGKPLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
G G+ L A+ Q ++ S L+Q + LF H PSI++I +I
Sbjct: 612 GLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSIIHLFLEVRRHTPSIIYIPDI 671
Query: 502 D 500
D
Sbjct: 672 D 672
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 122 bits (295), Expect = 4e-29
Identities = 67/191 (35%), Positives = 113/191 (59%), Gaps = 4/191 (2%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LLAKAVA + S F+ + G EL+ Y+G+ VR +F A +P ++F DE+
Sbjct: 697 PGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDEL 756
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDVKVIMATNRIETLDPALIRPG 329
D++ R +S+ G + R + +LL +LD D+ V VI ATNR + LDP+L+RPG
Sbjct: 757 DSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPG 815
Query: 328 RIDRKIEFPL-PDEKTKRRIFTIHTSRMTLADDVNLSELIMS-KDDLSGADIKAICTEAG 155
R D+ + + E++K + T L + ++L+E+ + + +GAD+ A+C++A
Sbjct: 816 RFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAV 875
Query: 154 LMALRERRMKV 122
L A++ + ++
Sbjct: 876 LSAIKRKTNEI 886
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 116 bits (280), Expect = 3e-27
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 1/182 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK LAKAVA + +TF + S+L+ K++G+ +LVR+LF +A E PSI+FIDEI
Sbjct: 171 PGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEI 230
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D++ R + S R I+ L +N + G D G V V+ ATN TLD A+ R R
Sbjct: 231 DSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RF 286
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMA 146
+++I PLP+ + R+F ++ ++ + + EL D SG+DI + +A +
Sbjct: 287 EKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEP 346
Query: 145 LR 140
+R
Sbjct: 347 VR 348
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 115 bits (276), Expect = 8e-27
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKLVRELFRVAE--------EHA 530
PGTGK L+A+ + +A ++V G E++ KY+G + VR+LF AE E
Sbjct: 313 PGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESG 372
Query: 529 PSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLDGFDSRGDVKVIMATNRIETL 353
I+ DE+DA+ KR +SGG+ + + + +LL ++DG D ++ VI TNR + +
Sbjct: 373 LHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMI 430
Query: 352 DPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT----LADDVNLSELIMSKDDLSGA 185
D AL+RPGR++ +E LPDE + +I IHTSRM L +DV++ EL + SGA
Sbjct: 431 DEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGA 490
Query: 184 DIKAICTEAGLMALRERRMKV 122
+I + A A R +KV
Sbjct: 491 EIAGLIKSASSFAF-YRHIKV 510
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2
Query: 716 NLPKGVILYGPPG 678
N KG++LYGPPG
Sbjct: 302 NHVKGILLYGPPG 314
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 113 bits (273), Expect = 2e-26
Identities = 60/188 (31%), Positives = 106/188 (56%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG GK LA A+++ F+ + G EL+ KY+G + VR+LF A+ P ++F DE
Sbjct: 649 PGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEF 708
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D+V +R ++G R + ++L Q+DG +S V ++ AT R + +DPAL+RPGR+
Sbjct: 709 DSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRL 765
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
D+ I LP+E+ + + +R + + L +L D + AD+ ++ +A L+A+
Sbjct: 766 DKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAV 825
Query: 142 RERRMKVT 119
+ +V+
Sbjct: 826 HKLLKRVS 833
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 102 bits (244), Expect = 6e-23
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 12/193 (6%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK +LA+AVA + ATF + S L KYLGD KLVR LF VA+ S++F+DEI
Sbjct: 421 PGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEI 480
Query: 502 DAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD---------VKVIMATNRIETL 353
D++ + R D SG E E R + E L Q + V V+ ATN +
Sbjct: 481 DSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCI 538
Query: 352 DPALIRPGRIDRKIEFPLPDEKTKRRIFT--IHTSRMTLADDVNLSELIMSKDDLSGADI 179
D A R R ++ PLP+++T+ + + +H L ++ +L EL+ + SG+DI
Sbjct: 539 DEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEE-DLEELVNLTEGYSGSDI 595
Query: 178 KAICTEAGLMALR 140
A+ +A + LR
Sbjct: 596 TALAKDAAMGPLR 608
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 99.5 bits (237), Expect = 4e-22
Identities = 61/182 (33%), Positives = 101/182 (55%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG GK +LAKA+A Q+ ATF+ V L K+ G+ KLV LF +A + P+I+FIDEI
Sbjct: 134 PGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEI 193
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D +R ++ +I+ + + + L SR V V+ ATNR +D A+ R R+
Sbjct: 194 DTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADIDEAIRR--RM 249
Query: 322 DRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMAL 143
+ PLP+ + +R+I ++ ++ L + + + ++ + LSG+ IK +C A +
Sbjct: 250 PKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPR 309
Query: 142 RE 137
RE
Sbjct: 310 RE 311
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2
Query: 710 PKGVILYGPPG 678
PKG++LYGPPG
Sbjct: 125 PKGLLLYGPPG 135
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 92.7 bits (220), Expect = 5e-20
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 14/195 (7%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PGTGK +LA+AVA ++ + F + S L K+LG+ KLVR LF +A++ +PSI+F+DEI
Sbjct: 501 PGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEI 560
Query: 502 DAVGTKRYDSNSGGEREIQRTM-LELLNQLDGF----DSRGD-----VKVIMATNRIETL 353
D++ + R S+ G E E R + E L Q SR V V+ ATN +
Sbjct: 561 DSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCI 618
Query: 352 DPALIRPGRIDRKIEFPLPDEKTKR----RIFTIHTSRMTLADDVNLSELIMSKDDLSGA 185
D A R R R+ PLPDE T+R + ++L D + ++ + + SG+
Sbjct: 619 DDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLED---IEAIVKATEYYSGS 673
Query: 184 DIKAICTEAGLMALR 140
D+ A+ +A + LR
Sbjct: 674 DLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 56.0 bits (129), Expect = 5e-09
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Frame = -3
Query: 682 PGTGKPLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 503
PG+GK A+A + + L +K L D +L L V + ++V ++++
Sbjct: 251 PGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNHLLSNVPPK---AVVLLEDV 303
Query: 502 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 323
D+ R S G T LLN LDG S + + M TN E LDPAL+RPGR+
Sbjct: 304 DSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRV 362
Query: 322 DRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSKD 200
D K + R +FT + +ADD LS+++ K+
Sbjct: 363 DVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPKN 402
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 550 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 371
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 342 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 518
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 519 TIEGACSSATRNSSRTNL 572
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 604 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 443
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 442 TMLEL 428
+E+
Sbjct: 288 RTMEV 292
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.6
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +3
Query: 81 YRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV 260
Y T SF L SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 223 YNTSSF--LPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTG 279
Query: 261 *MVKILLLVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNN 431
SS +S+ + P +S+ + S + +T ++ + + +
Sbjct: 280 STTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Query: 432 SNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 569
+ + SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 340 ATF----TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 289 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 110
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 109 FKK 101
FK+
Sbjct: 946 FKR 948
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 101 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 229
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 501 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 605
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.8
Identities = 46/177 (25%), Positives = 71/177 (40%)
Frame = +3
Query: 51 SPSGVPSFLRYRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKF 230
S S PS + RT S F+ SS T P+S + S+P SS SS K
Sbjct: 129 STSIAPSMIGTRTSSSYFITSSSST----------PSSSSSSSSSSPSSSSSKSSSSSKS 178
Query: 231 TSSANVILDV*MVKILLLVFSSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESK 410
+SS++ SS +S S P + SK S + IT T+P S
Sbjct: 179 SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS--SFITSTTPASSS 236
Query: 411 PSS*FNNSNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTNLGPS 581
S +V + + S T+S+SS+ + + SA+ +S+ ++ S
Sbjct: 237 SS-----GAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 241 LMSFLMYEW*KSFSWFSRQARG 306
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 220 ELIMSKDDLSGADIKAICTEAGLMALRER----RMKVTNEDFKKSKESVLYRKKEGTPEG 53
+L + + + K+ E+ L L E R+K NED +K++ L RK E E
Sbjct: 35 QLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEE 94
Query: 52 L 50
L
Sbjct: 95 L 95
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 490 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 356
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,213,547
Number of Sequences: 5004
Number of extensions: 69054
Number of successful extensions: 274
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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