SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3855
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14436-1|CAC14588.1|  284|Homo sapiens phosphatidic acid phospha...    29   4.8  
BC117133-1|AAI17134.1|  284|Homo sapiens phosphatidic acid phosp...    29   4.8  
BC039847-1|AAH39847.1|  284|Homo sapiens phosphatidic acid phosp...    29   4.8  
AF017116-1|AAC32041.1|  289|Homo sapiens type-2 phosphatidic aci...    29   4.8  
AF014403-1|AAC16033.1|  285|Homo sapiens type-2 phosphatidic aci...    29   4.8  
AF014402-1|AAC16032.1|  284|Homo sapiens type-2 phosphatidic aci...    29   4.8  
AB000888-1|BAA22593.1|  284|Homo sapiens phosphatidic acid phosp...    29   4.8  

>Y14436-1|CAC14588.1|  284|Homo sapiens phosphatidic acid
           phosphatase type 2 protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 142 NCSDGYIEYYICRGNAERVKEGRLS 166


>BC117133-1|AAI17134.1|  284|Homo sapiens phosphatidic acid
           phosphatase type 2A protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 142 NCSDGYIEYYICRGNAERVKEGRLS 166


>BC039847-1|AAH39847.1|  284|Homo sapiens phosphatidic acid
           phosphatase type 2A protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 142 NCSDGYIEYYICRGNAERVKEGRLS 166


>AF017116-1|AAC32041.1|  289|Homo sapiens type-2 phosphatidic acid
           phosphohydrolase protein.
          Length = 289

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 147 NCSDGYIEYYICRGNAERVKEGRLS 171


>AF014403-1|AAC16033.1|  285|Homo sapiens type-2 phosphatidic acid
           phosphatase alpha-2 protein.
          Length = 285

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 143 NCSDGYIEYYICRGNAERVKEGRLS 167


>AF014402-1|AAC16032.1|  284|Homo sapiens type-2 phosphatidic acid
           phosphatase alpha-1 protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 142 NCSDGYIEYYICRGNAERVKEGRLS 166


>AB000888-1|BAA22593.1|  284|Homo sapiens phosphatidic acid
           phosphatase 2a protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 326 HCSLGYLEVYILRDLAEHITGGRTS 400
           +CS GY+E YI R  AE +  GR S
Sbjct: 142 NCSDGYIEYYICRGNAERVKEGRLS 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,535,013
Number of Sequences: 237096
Number of extensions: 913481
Number of successful extensions: 3719
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3719
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -