Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3844
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 29 2.7
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 29 2.7
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 29 2.7
U00063-3|AAK18959.2| 446|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 28 4.6
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 28 6.1
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 28 6.1
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 28 6.1
AF067212-1|AAC16997.3| 160|Caenorhabditis elegans Hypothetical ... 28 6.1
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 73 EPGKPSTEPLPADPEARDAEV 135
EP +P+TEP+P E +D E+
Sbjct: 379 EPSEPATEPIPEPNEPKDEEI 399
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 73 EPGKPSTEPLPADPEARDAEV 135
EP +P+TEP+P E +D E+
Sbjct: 369 EPSEPATEPIPEPNEPKDEEI 389
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 73 EPGKPSTEPLPADPEARDAEV 135
EP +P+TEP+P E +D E+
Sbjct: 369 EPSEPATEPIPEPNEPKDEEI 389
>U00063-3|AAK18959.2| 446|Caenorhabditis elegans Hypothetical
protein F56C9.3 protein.
Length = 446
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 373 LQLISQGGRRIYVVNVYGLQ*PLNTRW 293
+QLI RRI+ VYG++ P+N W
Sbjct: 219 VQLIISSVRRIHDAAVYGIKDPINVSW 245
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 290 SPPGVKWLLEPIDIYNVNAPPTLRYKL*DLSIVTTAAPPFKPKSITASRQK 442
+P K + P + APPT+R + ++ TT APP + + S K
Sbjct: 3 TPVSTKKTIAPSTMKTTVAPPTMRTTMAPTTMKTTVAPPTMKTTRSPSTMK 53
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 604 ILCLILPIFQFIKLITKQP 548
+ C+ LPIF+ I+LI+K+P
Sbjct: 385 VFCVFLPIFEPIQLISKKP 403
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 VNLVDGVFIKGEPGKPSTEPLPADPEARDAEVNYRLLDGVVNLFETH--SIEVKMNPAEK 213
++LV F + +PS E + + ++ N L+D V N+ E++ S+E +++ K
Sbjct: 797 LHLVRDCFTERPSERPSIETVRSQLRGMNSSRNDNLMDHVFNMLESYASSLEEEVSERTK 856
Query: 214 EELQRSLEEGIVYF 255
E ++ + ++ +
Sbjct: 857 ELVEEKKKSDVLLY 870
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 VNLVDGVFIKGEPGKPSTEPLPADPEARDAEVNYRLLDGVVNLFETH--SIEVKMNPAEK 213
++LV F + +PS E + + ++ N L+D V N+ E++ S+E +++ K
Sbjct: 797 LHLVRDCFTERPSERPSIETVRSQLRGMNSSRNDNLMDHVFNMLESYASSLEEEVSERTK 856
Query: 214 EELQRSLEEGIVYF 255
E ++ + ++ +
Sbjct: 857 ELVEEKKKSDVLLY 870
>AF067212-1|AAC16997.3| 160|Caenorhabditis elegans Hypothetical
protein F37F2.2 protein.
Length = 160
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 436 AEIGAVVVPTRADLHEVLPPFGFIGFVERT 525
++I AV PT ++H+VL GF +ERT
Sbjct: 36 SQILAVENPTSVEIHDVLAAVGFNPLLERT 65
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 38 ASILSMVSLSRVNPGSHQRSLSPPTLRPE 124
A + ++ SL+ PG+ Q SLSP +L P+
Sbjct: 75 AELSNLTSLAHNGPGNSQCSLSPVSLTPD 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,339,851
Number of Sequences: 27780
Number of extensions: 262711
Number of successful extensions: 789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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